Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., flagellin domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  109 bits (272), Expect = 1e-28
 Identities = 100/383 (26%), Positives = 166/383 (43%), Gaps = 92/383 (24%)

Query: 1   MAVNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRG 60
           M++ +N N+ A+ A R L  +     TS  RLSSG ++ +A DDAAGL I   +      
Sbjct: 1   MSLVINHNMMALNASRNLNESYGRLATSTRRLSSGLRVGTAADDAAGLAIRELMRADIST 60

Query: 61  LDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALN 120
           +   VRNAND IS+                      +Q+A+G+            +  ++
Sbjct: 61  MRQGVRNANDAISM----------------------IQTADGA------------LQIID 86

Query: 121 DELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAE 180
           ++L R+ E       +   GT++                      SD R+M  + Y    
Sbjct: 87  EKLIRMKELAE----QAATGTYN----------------------SDQRLMIESEY---- 116

Query: 181 GKDKDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEK 240
                   QA A++IT               NA + + I  +   ++G  D   + + + 
Sbjct: 117 --------QAMASEITRI------------ANATDFNGIHLLDGTLSGTHD--GSGLRQT 154

Query: 241 GQLQIFAGNNKVTGDVAFSGGLAGALNMQAG------TAETVDTIDVTSVGGAQQSVAVI 294
           G+L+I  G    + +  +   + GA   Q G      +        +++   AQ ++  +
Sbjct: 155 GELKIHFGTGNDSNEDYYYIKIGGATASQLGIGNASASGAAAGGYTISTQSAAQNALTAL 214

Query: 295 DSALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQIL 354
           D A+   D  RA LGA QNR  + ISNL    EN+ +S+SRI D D A+E T   ++QIL
Sbjct: 215 DQAIISKDKIRAALGALQNRLENTISNLTIQAENLQSSESRISDVDVAEEMTEFVRNQIL 274

Query: 355 SQASSSVLAQAKQAPNAALSLLG 377
           +Q++ ++L+QA   P  A+ L+G
Sbjct: 275 TQSAVAMLSQANSLPQMAMKLIG 297