Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 608 a.a., protein containing flagellin N-terminal / flagellin C-terminal from Marinobacter adhaerens HP15

 Score =  182 bits (463), Expect = 2e-50
 Identities = 126/350 (36%), Positives = 187/350 (53%), Gaps = 20/350 (5%)

Query: 5   VNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVA 64
           +NTN+A++ AQR L  +      ++ERLSSG +INSAKDDAAGL IS R   Q  GL+ A
Sbjct: 5   INTNIASLNAQRNLNASQGQANVALERLSSGLRINSAKDDAAGLAISERFQSQIAGLNQA 64

Query: 65  VRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELN 124
            RNANDGIS+AQTAEGAM+E TN LQR+R+L++QSAN +NS S+R A+ +E+    +E+N
Sbjct: 65  QRNANDGISLAQTAEGAMDEITNNLQRIRELAVQSANATNSPSDRQALNQEVQQRIEEIN 124

Query: 125 RIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSD------NRMMGGTSYVA 178
           RIA  TSF G K+L+GTF T++FQ+GA+ GE + ++  D R            G ++ V 
Sbjct: 125 RIAAQTSFNGLKVLDGTFDTQTFQVGANTGETIAISGLDSRGSQIGSVLKETAGLSTDVI 184

Query: 179 AEGKDKDWKVQAGANDITFTLK---DIDGNDQTITVNAKEGDDIEEVATYI-----NGQT 230
             G+     +     D T  L     I G D  +++ A    D + +AT +     NG  
Sbjct: 185 GPGEAATTDLNVSTLDFTTDLTITGTIGGED--VSIAAASYADADALATALQTEIQNGGG 242

Query: 231 DMVKASVNEKGQLQIFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQS 290
           D+ + +V   G   +   N   T     S  ++ A  +   TA+  +T   T++ GA  +
Sbjct: 243 DLAEVTVTVDGN-TLTITNPTSTDFPVTSFSISDASGVAGTTAD--NTGGGTNIAGAGGT 299

Query: 291 VAVIDSALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTD 340
             +  S L + +      G        A S+ D++   + A     +D D
Sbjct: 300 DTIDVSGLDFTNGGTITFGGVDYPIT-AGSDFDDVAAELQAQLQANEDPD 348



 Score =  101 bits (251), Expect = 6e-26
 Identities = 84/291 (28%), Positives = 138/291 (47%), Gaps = 27/291 (9%)

Query: 102 GSNSKSERVAIQEEITALNDELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTL 161
           GS+       +Q ++ A  D    +A     G   + NG  +T      AD+ +   +++
Sbjct: 327 GSDFDDVAAELQAQLQANEDPDLTVANAG--GTLTITNGGAATP-----ADDVDPGTISI 379

Query: 162 KD-MRSDNRMMGGTSYVAAEGKDKDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIE 220
           +D   + N  +GG +  + +G +     Q+ AN  T+   ++D N    T        + 
Sbjct: 380 EDGTGTPNNSIGG-ALTSIDGAEDLTLAQSFANGDTYNF-EVDINGDVFTFEGM--GSLS 435

Query: 221 EVATYINGQTDM--VKASVNEKGQLQIFAGNNKVTGDVAFSGGLAG------------AL 266
           ++ + IN Q+    ++A++N      IF+       D+     + G            A+
Sbjct: 436 DIVSQINAQSTQTGIRANLNSDNDEIIFSSQFGEAFDITIDADIDGDGIFGGVDDYNQAV 495

Query: 267 NMQ-AGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNRFNHAISNLDNI 325
           N   A     V  +D++S  GA  ++  ID A+  ++ +RAELGA QNRF   I+NL   
Sbjct: 496 NATIADDTYAVTGVDISSRDGADLAMISIDYAIDTINGYRAELGAVQNRFESTIANLATT 555

Query: 326 NENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPNAALSLL 376
           +EN++AS SRI+D DFA E+  L ++Q+L QA  SVLAQA   P   L LL
Sbjct: 556 SENLSASNSRIRDADFAAESAELARTQVLQQAGLSVLAQANARPQQVLQLL 606