Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 614 a.a., flagellin FliC from Marinobacter adhaerens HP15

 Score =  202 bits (513), Expect = 3e-56
 Identities = 144/381 (37%), Positives = 205/381 (53%), Gaps = 28/381 (7%)

Query: 1   MAVNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRG 60
           MA+ +NTNVA+++AQ  L  + N    ++ERLSSG +INSAKDDAAGL IS R   Q  G
Sbjct: 1   MALGINTNVASLSAQNQLGQSQNLSNQALERLSSGLRINSAKDDAAGLAISTRFQSQISG 60

Query: 61  LDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALN 120
           L+VA RNANDGIS+AQTAEGA++E TN LQR+R+L++QSAN +NS S+R A+ +E+    
Sbjct: 61  LNVATRNANDGISLAQTAEGALDEITNNLQRIRELAVQSANATNSDSDREALNQEVDQRI 120

Query: 121 DELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSD--NRMMGGTSYVA 178
            E+NRIA  TSF G K+L+GTF T++FQ+GA+ GE + +   D R       +  TS +A
Sbjct: 121 AEVNRIASQTSFNGLKVLDGTFGTQAFQVGANAGETISVAGLDSRGSQLGATISQTSGLA 180

Query: 179 AEGKDKDWKVQAGANDITFTLKDIDGNDQT--ITVNAKEGDDIEEVATYINGQTDMVKAS 236
           A           GA D   T  D+ G D +  ITV++  G +  +VA       D +  +
Sbjct: 181 A--------TSLGAGDAGETSLDVSGLDFSGDITVSSTIGGETIDVAAATYADADALAQA 232

Query: 237 VNEKGQLQIFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDS 296
           +    Q +I +  N     VA S      +   A T +   TID++   G Q SV   D 
Sbjct: 233 I----QGEIDSNGNLADVTVAASDDGNSIVFSNASTTDIAATIDISDASGTQVSVTGADV 288

Query: 297 ALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQ 356
           +     +   ++  F        S LD ++  V  S      TD +  TT ++ S  L+ 
Sbjct: 289 STTDGSTTATQVTLFDP------STLD-LDSGVTGS---FDVTDDSSNTTTVSFS--LAA 336

Query: 357 ASSSVLAQAKQAPNAALSLLG 377
            + + LA    A  A L+  G
Sbjct: 337 GTGNTLADLTSAVQAGLTAAG 357



 Score =  105 bits (261), Expect = 4e-27
 Identities = 104/371 (28%), Positives = 163/371 (43%), Gaps = 46/371 (12%)

Query: 36  FKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISIAQTAEGAMNETTNILQRMRDL 95
           F   S  D AA + IS+     + G  V+V  A+       T +G+   T   L     L
Sbjct: 259 FSNASTTDIAATIDISD-----ASGTQVSVTGAD-----VSTTDGSTTATQVTLFDPSTL 308

Query: 96  SLQSA-----NGSNSKSERVAIQEEITALNDELNRIAETTSFGGNKLLNGTFSTKSFQIG 150
            L S      + ++  S    +   + A     N +A+ TS     L    F+  +    
Sbjct: 309 DLDSGVTGSFDVTDDSSNTTTVSFSLAAGTG--NTLADLTSAVQAGLTAAGFTAGTDLGA 366

Query: 151 ADNGEAVML-------------TLKDMRSDNRMMGGTSYVAAEGKDKDWKVQAGANDITF 197
            D+G  V +             T  D  + N   GG+       +++    +  A + T 
Sbjct: 367 VDDGSVVQIESDSAVTYDIANITASDGGTPNASTGGSVSTLTAAEEQTVASRFEAGETTS 426

Query: 198 TLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDM--VKASVNEKGQLQIFA---GNN-- 250
              ++ G    +T    +  ++++V   ING T    V A ++  G   +FA   G N  
Sbjct: 427 FSLNVAGEAIEVT----DASNLQDVVAQINGATKDTGVSAFLSSSGDDIVFASAKGENFT 482

Query: 251 -KVTGDVAFSGGLAGALNMQAGTAE----TVDTIDVTSVGGAQQSVAVIDSALKYVDSHR 305
             +T DV   G     L + + T      +V+ +D+++  G+ Q++  +D A+  V+  R
Sbjct: 483 ASITTDVDGDGTNEVDLTVDSSTDPNSNVSVNGLDISTRAGSDQALVAVDFAIDQVNQFR 542

Query: 306 AELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQA 365
           ++LGA QNRF   I+NL    EN++AS SRI D DFA ET  L+K+Q+L QA  SVLAQA
Sbjct: 543 SDLGAVQNRFESTIANLSTSVENLSASNSRILDADFAAETAKLSKAQVLQQAGISVLAQA 602

Query: 366 KQAPNAALSLL 376
              P   LSLL
Sbjct: 603 NARPQQVLSLL 613