Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., flagellin, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  112 bits (281), Expect = 1e-29
 Identities = 100/377 (26%), Positives = 158/377 (41%), Gaps = 81/377 (21%)

Query: 1   MAVNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRG 60
           M++ +N N+ A  A R L  +     TS+ RLSSG ++ +A DDAAGL +   +      
Sbjct: 1   MSLVINHNLMAQNASRNLGDSYTKLSTSVRRLSSGLRVGNAADDAAGLAVRELMRADIAA 60

Query: 61  LDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALN 120
           L   VRNAND IS+                      +Q+A+G+            +  ++
Sbjct: 61  LSQGVRNANDAISM----------------------IQTADGA------------LGVID 86

Query: 121 DELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAE 180
           ++L R+ E       +   GT++                      SD R++  + Y    
Sbjct: 87  EKLIRMKELAE----QAATGTYT----------------------SDQRLIIDSEY---- 116

Query: 181 GKDKDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEK 240
                   QA A++IT   K  D N   +      GD          G+  +   + N+ 
Sbjct: 117 --------QAMASEITRIAKMTDFNGVYLLNGNLSGDTHSGSGLQSTGKMKVHFGTANDS 168

Query: 241 GQLQIFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKY 300
            +   +   N  T      G  AG+         T     +++   AQ ++  + +A+  
Sbjct: 169 SEDYYYVQINAATSSALGVGTEAGS---------TAKAYSISTQSAAQAALEGLTNAIVS 219

Query: 301 VDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSS 360
            D  RA LGA QNR  + ISNL    EN+ A++SRI D D + E T   + QILSQ++ +
Sbjct: 220 KDKIRASLGALQNRLENTISNLQIQAENLQAAESRISDVDVSMEMTEFVRQQILSQSAVA 279

Query: 361 VLAQAKQAPNAALSLLG 377
           +L+QA   P  AL+LLG
Sbjct: 280 MLSQANSLPRLALNLLG 296