Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., flagellin (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  114 bits (285), Expect = 3e-30
 Identities = 107/385 (27%), Positives = 165/385 (42%), Gaps = 96/385 (24%)

Query: 1   MAVNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRG 60
           M++ +N N+ AM A R LT +     TS  RLSSG ++N+A DDAAGL I   +      
Sbjct: 1   MSLVINHNMMAMNAARNLTDSYGRLATSTRRLSSGLRVNTAADDAAGLAIRELMRADIST 60

Query: 61  LDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALN 120
           L   +RNAND IS+                      +Q+A+G+            +  ++
Sbjct: 61  LRQGIRNANDAISM----------------------IQTADGA------------LQIID 86

Query: 121 DELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAE 180
           ++L R+ E       +   GT++                      SD R+M  + Y    
Sbjct: 87  EKLIRMKELAE----QAATGTYN----------------------SDQRLMIESEY---- 116

Query: 181 GKDKDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEK 240
                   QA A++IT      D N   +   +  G          NG        + + 
Sbjct: 117 --------QAMASEITRIANATDFNGIHLLNGSLSGVH--------NGSV------LQQS 154

Query: 241 GQLQIFAGNNKVTGD----VAFSGGLAGALNMQAGTAETVDT----IDVTSVGGAQQSVA 292
           G L+I  G    + +    +   G  A  L +  G A  + T      +++   AQ ++A
Sbjct: 155 GALKIHFGTGNDSAEDYYYIEIGGATASMLGL--GNASALGTEAGGYTISTQSAAQAALA 212

Query: 293 VIDSALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQ 352
            ID A+   D  RA LGA QNR  + ISNL    EN+ +S+SRI D D A E T   ++Q
Sbjct: 213 AIDQAIISKDKIRASLGALQNRLENTISNLSIQAENLQSSESRISDVDVATEMTEFVRNQ 272

Query: 353 ILSQASSSVLAQAKQAPNAALSLLG 377
           IL+Q++ ++L+QA   P  A+ L+G
Sbjct: 273 ILTQSAVAMLSQANSLPQMAMKLIG 297