Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., flagellar hook-associated protein FlgL from Caulobacter crescentus NA1000

 Score = 57.4 bits (137), Expect = 7e-13
 Identities = 94/424 (22%), Positives = 164/424 (38%), Gaps = 60/424 (14%)

Query: 3   VNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLD 62
           V    ++ A+     L+ A     ++  R+S+G +I+S +D+ A   IS R+  ++R   
Sbjct: 2   VGGGVSLNALRGAAALSEADARLSSAGNRVSTGRRIDSPRDNGATWSISRRMATEARSFQ 61

Query: 63  VAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDE 122
           V   +   G S+   A   + +  + L   R+ +L   + S  +  ++A+  ++  L D+
Sbjct: 62  VVNDSLARGASMLDVAAAGVEQIHDFLATAREKALALRDPSLDEPSKLALVADVKMLVDQ 121

Query: 123 LNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAEGK 182
           +NR+A    F G + L    +T S          V  T     S        S VAA+  
Sbjct: 122 VNRVAMQAVFDGKRPLADKLTTGSVTYSQTTYNPV-TTAATPASLGGAFVNASGVAAQTF 180

Query: 183 DKDWKVQAGANDI---TFTLKDI-----DGNDQTITVNAKEGDDIEEVA-TYINGQTDM- 232
            +D     G  D+    + + D+      G  +  T     G      A T ++G++ + 
Sbjct: 181 LRDGGATPGRIDLYLDAYGVPDVLEIWQGGARRAATGQGFVGGGAPVAAGTAVSGRSILS 240

Query: 233 ----------VKASVNEKGQ------------LQIFAGNNKVTGDVAFS----------- 259
                     ++   NE G             LQ  A     T   +F+           
Sbjct: 241 FDYNPASGHDIEFRFNEAGSLAGTAWAVDAIALQPLASARPTTNTTSFTVPDVTTSSATG 300

Query: 260 -------GGLAGALNMQAGTAET--VDTIDVTSVGGAQQSVAVIDSALKYVDSHRAELGA 310
                   G +  +  Q  TAE   +DTID T+VGG  +SV   + AL    +     G 
Sbjct: 301 YDFTSDPNGGSELVTSQPLTAEALDLDTIDWTNVGGIFESV---EQALNKTRAAGIYFGG 357

Query: 311 FQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPN 370
            Q  F   I+    +++ +      + D D A+E+  L   Q L +AS+S+ +QA    N
Sbjct: 358 RQESFAGLIAQNRLMSDTLATGVGNLVDADLARESARL---QAL-EASASLASQALSIAN 413

Query: 371 AALS 374
           +  S
Sbjct: 414 SQQS 417