Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., flagellin FljJ from Caulobacter crescentus NA1000

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 52/175 (29%), Positives = 89/175 (50%), Gaps = 6/175 (3%)

Query: 1   MAVNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRG 60
           MA++VNTN  A+ A + L    +  Q    R+++G  I++AKD+AA   I+         
Sbjct: 1   MALSVNTNQPALIALQNLNRTNDDMQAVQTRINTGEAISTAKDNAAVWSIAQAQRADMSA 60

Query: 61  LDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALN 120
           L     + +   SIA  A  A    +++L+ MR+  + + + S + + R A+  +   L 
Sbjct: 61  LGAVKMSLDRATSIADVALAAGESVSDLLKLMREKVVAAKDTSLTTTSRQALNADFQGLI 120

Query: 121 DELNRIAETTSFGGNKLLNGT-FSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGT 174
             LN++  + +F G  LL+G+  +  SF   AD G+A+ LTL+     N  +GGT
Sbjct: 121 KNLNQVLRSATFDGANLLDGSQAADMSFLADADAGQAITLTLQ-----NLSLGGT 170



 Score = 38.9 bits (89), Expect = 2e-07
 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 6/114 (5%)

Query: 262 LAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNRFNHAISN 321
           L G +N    T + +D ++   V      +  +D+ L  V+     +G    + +   + 
Sbjct: 167 LGGTINTLTATDDILDPVNAAGV------LTRLDATLSAVNQAVGNIGTQAKQIDAHNTF 220

Query: 322 LDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPNAALSL 375
           +  +N+ +      + D D AKE+  L   Q+  Q  +  L+ A  AP   LSL
Sbjct: 221 VAKLNDVLETGVGNLVDADLAKESARLQALQVKQQLGAQALSIANGAPQIILSL 274