Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., flagellin FljO from Caulobacter crescentus NA1000

 Score = 67.0 bits (162), Expect = 6e-16
 Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 8/227 (3%)

Query: 1   MAVN-VNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSR 59
           MA+N +NTN  A+ A + L   ++      +R+S+G KI SAKD+ A    +   +  + 
Sbjct: 1   MALNSINTNSGALIALQNLNTTSSELNNVQQRISTGKKIGSAKDNGAIWATAKNQSATAN 60

Query: 60  GLDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITAL 119
            ++    +   G S    A  A +  T++L +M++ +L +++ S S +   A++ +  +L
Sbjct: 61  SINAVKDSLQRGQSTIDVALAAGDTITDLLGKMKEKALAASDTSLSTASFNALKADFDSL 120

Query: 120 NDELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAA 179
            D++ + A    F G  + +GT +  SF   +D G A  +T K +      +  TS    
Sbjct: 121 RDQVTKAATNAKFNGVSIADGTTTKLSFLANSD-GSAFTVTAKTLTLGGLGLTTTSSFTT 179

Query: 180 EGKDK------DWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIE 220
               K      D  +Q   N +        G D  +T   K  D ++
Sbjct: 180 AAAAKTMIGTIDTALQTATNKLASLGTSSTGLDTHLTFVGKLQDSLD 226



 Score = 50.8 bits (120), Expect = 4e-11
 Identities = 64/286 (22%), Positives = 115/286 (40%), Gaps = 29/286 (10%)

Query: 101 NGSNSKSERVAIQEEITALNDELNRIAETTSFG---GNKLLNGTF--STKSFQIGADNGE 155
           N  N+ S  +   + +   + ELN + +  S G   G+   NG    + K+    A++  
Sbjct: 4   NSINTNSGALIALQNLNTTSSELNNVQQRISTGKKIGSAKDNGAIWATAKNQSATANSIN 63

Query: 156 AVMLTLKDMRS--DNRMMGGTSYVAAEGKDKDWKVQAGANDITFTLKDIDGNDQTITVNA 213
           AV  +L+  +S  D  +  G +     GK K+  + A    ++           T + NA
Sbjct: 64  AVKDSLQRGQSTIDVALAAGDTITDLLGKMKEKALAASDTSLS-----------TASFNA 112

Query: 214 KEGDDIEEVATYINGQTDMVKASVNEK-GQLQIFAGNNKVTGDVAFSGGLA---GALNMQ 269
            + D       + + +  + KA+ N K   + I  G       +A S G A    A  + 
Sbjct: 113 LKAD-------FDSLRDQVTKAATNAKFNGVSIADGTTTKLSFLANSDGSAFTVTAKTLT 165

Query: 270 AGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNRFNHAISNLDNINENV 329
            G      T   T+   A+  +  ID+AL+   +  A LG      +  ++ +  + +++
Sbjct: 166 LGGLGLTTTSSFTTAAAAKTMIGTIDTALQTATNKLASLGTSSTGLDTHLTFVGKLQDSL 225

Query: 330 NASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPNAALSL 375
           +A    + D D AKE+  L   Q   Q     L+ A  + +A LSL
Sbjct: 226 DAGVGNLMDADLAKESARLQSLQTKQQLGVQALSIANSSSSAILSL 271