Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., flagellin FljM from Caulobacter crescentus NA1000

 Score = 67.0 bits (162), Expect = 6e-16
 Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 10/228 (4%)

Query: 1   MAVN-VNTNVAAMTAQRYLTGATNAQQTSME-RLSSGFKINSAKDDAAGLQISNRLNVQS 58
           MA+N +NTN  A+ A + L  +TNA+ T ++ R+++G KI SAKD+ A    +   +  +
Sbjct: 1   MALNSINTNSGALIALQNLN-STNAELTQVQQRINTGKKIGSAKDNGAIWATAKNQSATA 59

Query: 59  RGLDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITA 118
             ++    +   G S    A  A +  T++L +M++ +L +++ S + +   A++ +  +
Sbjct: 60  GSMNAVKDSLQRGQSTIDVALAAGDTITDLLGKMKEKALAASDTSLNTASFNALKSDFDS 119

Query: 119 LNDELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVA 178
           L D++ + A    F G  + +GT +  SF   +D G A  +T K +      +  TS   
Sbjct: 120 LRDQITKAASNAKFNGVSIADGTTTKLSFLANSD-GSAFTVTAKTLTLGGLGLTATSSFT 178

Query: 179 AEGKDK------DWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIE 220
                K      D  +Q   N +        G D  +T   K  D ++
Sbjct: 179 TAAAAKTMIGTIDTALQTATNKLASLGTSSTGLDTHLTFVGKLQDSLD 226



 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 62/285 (21%), Positives = 110/285 (38%), Gaps = 31/285 (10%)

Query: 95  LSLQSANGSNSKSERVAIQEEITALNDELNRIAETTSFGGNKLLNGTFSTKSFQIGADNG 154
           ++LQ+ N +N+         E+T +   +N   +  S   N  +  T   +S   G+ N 
Sbjct: 14  IALQNLNSTNA---------ELTQVQQRINTGKKIGSAKDNGAIWATAKNQSATAGSMNA 64

Query: 155 EAVMLTLKDMRSDNRMMGGTSYVAAEGKDKDWKVQAGANDITFTLKDIDGNDQTITVNAK 214
               L       D  +  G +     GK K+  + A            D +  T + NA 
Sbjct: 65  VKDSLQRGQSTIDVALAAGDTITDLLGKMKEKALAAS-----------DTSLNTASFNAL 113

Query: 215 EGDDIEEVATYINGQTDMVKASVNEK-GQLQIFAGNNKVTGDVAFSGGLA---GALNMQA 270
           + D       + + +  + KA+ N K   + I  G       +A S G A    A  +  
Sbjct: 114 KSD-------FDSLRDQITKAASNAKFNGVSIADGTTTKLSFLANSDGSAFTVTAKTLTL 166

Query: 271 GTAETVDTIDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNRFNHAISNLDNINENVN 330
           G      T   T+   A+  +  ID+AL+   +  A LG      +  ++ +  + ++++
Sbjct: 167 GGLGLTATSSFTTAAAAKTMIGTIDTALQTATNKLASLGTSSTGLDTHLTFVGKLQDSLD 226

Query: 331 ASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPNAALSL 375
           A    + D D AKE+  L   Q   Q     L+ A Q+ ++ LSL
Sbjct: 227 AGVGNLVDADLAKESAKLQSLQTKQQLGVQALSIANQSSSSILSL 271