Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., flagellin from Burkholderia phytofirmans PsJN

 Score =  204 bits (519), Expect = 3e-57
 Identities = 134/393 (34%), Positives = 215/393 (54%), Gaps = 33/393 (8%)

Query: 3   VNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLD 62
           + +N+N+ ++ AQ+ L G+ +A   ++ RLSSG +INSA DDAAGL IS R+  Q  GL+
Sbjct: 2   LGINSNINSLVAQQNLNGSQSALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGLN 61

Query: 63  VAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDE 122
             V NANDG+S+ QTA  A++  T+ LQR+R L++Q++ GS S S++ A+Q+E++A   E
Sbjct: 62  QGVSNANDGVSMIQTASSALSSLTSSLQRIRQLAVQASTGSLSSSDQAALQKEVSAQIAE 121

Query: 123 LNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGT-------- 174
           +NRIA  T++ G  +L+G+  + +FQ+GA+ G+ + L L    S  ++ GG         
Sbjct: 122 VNRIASQTTYNGTNILDGSAGSVTFQVGANVGQTISLDLSQSMSAAKIGGGLVQTGQTVG 181

Query: 175 ----------SYVAAEGKDKDWKVQA-GANDITFTLKDIDGNDQTITVNAKEGDDIEEVA 223
                     +Y +         V + G    TFT    D N+  IT        I    
Sbjct: 182 TIAVSLNASGAYTSTGATITSVNVLSDGKGGYTFT----DQNNTAITSGVSSA--IFTAG 235

Query: 224 TYINGQTDMVKASVNEKGQLQIFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTS 283
           T     T +   +++        AG+      VA       A+N       TV  +D+++
Sbjct: 236 TAAGTGTAVTNLTLSASAVTTAGAGSAAAVASVA----QINAIN----NPPTVSGLDIST 287

Query: 284 VGGAQQSVAVIDSALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAK 343
           V GA +++  ID+AL+ V++ +A LGA QNRF    ++    + ++++++S+I D +FA+
Sbjct: 288 VTGANEAMVSIDNALQTVNTLQAALGAAQNRFTAIATSQQAESTDLSSAQSQITDANFAQ 347

Query: 344 ETTALTKSQILSQASSSVLAQAKQAPNAALSLL 376
           ET  L+K+Q+L QA  SVLAQA   P   L LL
Sbjct: 348 ETANLSKAQVLQQAGISVLAQANSNPQQVLKLL 380