Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., flagellin domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  184 bits (467), Expect = 2e-51
 Identities = 95/161 (59%), Positives = 122/161 (75%)

Query: 1   MAVNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRG 60
           MA+ VNTNV ++ AQ+ L  + +   TSMERLSSG +INSAKDDAAGL ISNRLN Q RG
Sbjct: 1   MAITVNTNVTSLKAQKNLNTSASGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60

Query: 61  LDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALN 120
           L+V +RNAND ISIAQ +EGAM E TN+LQRMRDL++QS NG+NS  +  AIQ+EI  L 
Sbjct: 61  LEVGMRNANDAISIAQISEGAMQEQTNMLQRMRDLTVQSENGANSTDDLDAIQKEIDQLA 120

Query: 121 DELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTL 161
            E+  I + T+FG  KLL+GTFS K+FQ+G  +GE + +++
Sbjct: 121 LEITEIGDNTAFGSTKLLDGTFSGKTFQVGHQSGEDITISV 161



 Score =  105 bits (261), Expect = 2e-27
 Identities = 66/177 (37%), Positives = 97/177 (54%), Gaps = 10/177 (5%)

Query: 209 ITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQLQIFAGNNKVTGDVA---FSGGLAGA 265
           +TV ++ G +  +    I  + D +   + E G    F     + G  +   F  G    
Sbjct: 95  LTVQSENGANSTDDLDAIQKEIDQLALEITEIGDNTAFGSTKLLDGTFSGKTFQVGHQSG 154

Query: 266 LNMQAGTAET------VDTIDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNRFNHAI 319
            ++    A+T      VD++D+T    A  ++A ID+A+K +DS RA+LGA QNR  + I
Sbjct: 155 EDITISVAKTTASALKVDSLDITGSARAS-ALAAIDAAIKTIDSQRADLGAKQNRLAYNI 213

Query: 320 SNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPNAALSLL 376
           SN  N   N+  +KSRI D DFAKET+ +TK+Q+L Q  S++LAQA Q P  ALSLL
Sbjct: 214 SNSANTQANIADAKSRIVDVDFAKETSQMTKNQVLQQTGSAMLAQANQLPQVALSLL 270