Pairwise Alignments
Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056
Subject, 403 a.a., flagellar hook-associated protein FlgL (RefSeq) from Shewanella sp. ANA-3
Score = 59.3 bits (142), Expect = 2e-13
Identities = 94/378 (24%), Positives = 150/378 (39%), Gaps = 53/378 (14%)
Query: 29 MERLSSGFKINSAKDD-AAGLQISNRLNVQSRGLDVAVRNANDGISIAQTAEGAMNETTN 87
+E+LSSG K+N+A DD A L I N LN ++ +D ++N + + E + N
Sbjct: 27 LEQLSSGKKVNTAGDDPVAALGIDN-LNQRNALVDQFMKNIDYATNRLAVTESKLGSAEN 85
Query: 88 ILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRIAETTSFGGNKLLNGTFSTKSF 147
+ +R+ +++ NG+ + SER I +E+ +EL IA + GN + +G +ST
Sbjct: 86 LASSIREQVMRAVNGTLADSERQMIADEMKGSLEELLSIANSKDESGNYMFSG-YSTDKE 144
Query: 148 QIGADNGEAVMLTL---KDMRSDNRMMGGTSYVAAEGKDKDWKVQAGANDITFTLKDIDG 204
DN + +R+ G G K G D +++ +
Sbjct: 145 PFAFDNSTPPKIVYSGDSGIRNSLVQSGVALGTNVPGDTAFMKAPNGLGD--YSVNYLAS 202
Query: 205 NDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKG--QLQIF-AGNNKVTGDVAFSGG 261
+V + I + ATY+ T S N G LQ+ + NN V F
Sbjct: 203 QQGEFSVKTAK---IADPATYL-ADTYTFNFSDNGSGGTNLQVLDSANNPVANIANFDAA 258
Query: 262 LAGALN---------MQAGTAETV---------DTI--------DVTSVGGAQ------Q 289
+ N AG + T+ DTI D S Q Q
Sbjct: 259 TPVSFNGIEVNISGKPSAGDSFTMEPQSEVSIFDTISRAIALIEDPNSANTPQGRSQLAQ 318
Query: 290 SVAVIDSALKYVDSHRAELGAFQNRFNHAISNLD-NINENV--NASKSRIKDTDFAKETT 346
+ IDS + + S R+ G N S D +I E V ++ S ++D D+A T
Sbjct: 319 ILNDIDSGVNQISSARSVAG---NNLKAVESYKDTHIEEQVLNTSALSLLEDLDYASAIT 375
Query: 347 ALTKSQILSQASSSVLAQ 364
K Q+ A SSV ++
Sbjct: 376 EFAKQQLALNAVSSVFSK 393
Score = 27.7 bits (60), Expect = 6e-04
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 318 AISNLDNINENVNASKSRIKDTDFAKETTALTKSQILS--QASSSVLAQAKQAPNAALS 374
A +DN+N+ +K+ D+A A+T+S++ S +SS+ Q +A N L+
Sbjct: 45 AALGIDNLNQRNALVDQFMKNIDYATNRLAVTESKLGSAENLASSIREQVMRAVNGTLA 103