Pairwise Alignments
Query, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056
Subject, 283 a.a., Flagellin protein FlaA from Pseudomonas fluorescens FW300-N2E2
Score = 186 bits (472), Expect = 7e-52
Identities = 90/161 (55%), Positives = 128/161 (79%)
Query: 1 MAINVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRG 60
MA+ VNTNV+++ Q+ LN A+D + SM RLSSG KINSA+DDAAGLQI+ R+TSQ RG
Sbjct: 1 MALTVNTNVTSLNVQKNLNRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRMTSQIRG 60
Query: 61 LDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALN 120
+A+KNANDGISIAQTAEGA+ E+TNILQRMR+LA+Q+ N SN +++R A+ +E + ++
Sbjct: 61 QTVAIKNANDGISIAQTAEGALQESTNILQRMRELAVQARNDSNGTADREALNKEFAQMS 120
Query: 121 DELNRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSM 161
DEL RIAE+T+ G L++GS G+ +FQ+G+++G +++
Sbjct: 121 DELTRIAESTNLNGKNLIDGSAGTMTFQVGSNTGATNQITL 161
Score = 104 bits (259), Expect = 3e-27
Identities = 86/285 (30%), Positives = 135/285 (47%), Gaps = 28/285 (9%)
Query: 112 IQEEVSALNDE--LNRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSMGS-----M 164
+ V++LN + LNR ++ S +L +G +I + +A L + + +
Sbjct: 5 VNTNVTSLNVQKNLNRASDALSTSMTRLSSG------LKINSAKDDAAGLQIATRMTSQI 58
Query: 165 RSDTQAMGGKSYRAQEGKAADWRVGAATDLTLSYTNKQGEAREVTINAKQGDDLEELATY 224
R T A+ + + A+ + +T++ +AR + + L +
Sbjct: 59 RGQTVAIKNANDGISIAQTAEGALQESTNILQRMRELAVQARNDSNGTADREALNKEFAQ 118
Query: 225 INGQTEDVKASVGEDGKLQLFASSQKVNGDVTIGGGLGGEI------GFDAGR------- 271
++ + + S +GK + S+ + V G +I GFDA
Sbjct: 119 MSDELTRIAESTNLNGKNLIDGSAGTMTFQVGSNTGATNQITLTLDSGFDAATLSVDSAA 178
Query: 272 -NVTVADVNVSTVAGSQEAVSILDGALKAVDSQRASLGAFQNRFGHAISNLDNVNENVNA 330
+T +D + + A + A+ +D AL ++S RA LGA QNR ISNL NVNEN A
Sbjct: 179 IAITGSD-STTAEASTSAAIVAIDAALATINSSRADLGAAQNRLTSTISNLQNVNENAAA 237
Query: 331 SRSRIRDTDYARETTAMTKAQILQQASTSVLAQAKQSPSAALSLL 375
+ R++DTD+A ET +TK Q LQQASTSVLAQA Q PSA L LL
Sbjct: 238 ALGRVQDTDFAAETAQLTKQQTLQQASTSVLAQANQLPSAVLKLL 282