Pairwise Alignments

Query, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., flagellin A from Sinorhizobium meliloti 1021

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 101/399 (25%), Positives = 175/399 (43%), Gaps = 37/399 (9%)

Query: 4   NVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDM 63
           ++ TN SAM A   L   +  M+ +  R+SSG ++ SA D+AA   I+  + S ++ L  
Sbjct: 3   SILTNNSAMAALSTLRSISSSMEDTQSRISSGLRVGSASDNAAYWSIATTMRSDNQALSA 62

Query: 64  AVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALNDEL 123
                  G +   TA   M     +++ ++   + +   +    ++  IQEE++ L D+L
Sbjct: 63  VQDALGLGAAKVDTAYSGMESAIEVVKEIKAKLVAA---TEDGVDKAKIQEEITQLKDQL 119

Query: 124 NRIAETTSFGGNKL----LNGSFGSKSFQIG--ADSGEAVMLSM--GSMRSDTQAMGGKS 175
             IAE  SF G       L+G   +KS   G   DS  AV +     S+ +DT       
Sbjct: 120 TSIAEAASFSGENWLQADLSGGPVTKSVVGGFVRDSSGAVSVKKVDYSLNTDTVLFDTTG 179

Query: 176 YRAQEGKAADWRVGAATDLTLSYTNKQGEAREVTINAKQGDDLEELATYINGQTEDVKAS 235
                 K   + V  A+ +TL   N  G   E T+ A   DDL + +   +G   +V A 
Sbjct: 180 NTGILDKV--YNVSQAS-VTLP-VNVNGTTSEYTVGAYNVDDLIDASATFDGDYANVGAG 235

Query: 236 --VGEDGKLQ--------LFASSQKV---------NGDVTIGGGLGGEIGFDAGRNVTVA 276
              G+  K+Q        + A+ Q+V           D T+ G     +   A  ++   
Sbjct: 236 ALAGDYVKVQGSWVKAVDVAATGQEVVYDDGTTKWGVDTTVTGAPATNVA--APASIATI 293

Query: 277 DVNVSTVAGSQEA-VSILDGALKAVDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRI 335
           D+ ++  AG+ +A ++ +D AL  + S  ASLG+  +R       ++ +++++++   R+
Sbjct: 294 DITIAAQAGNLDALIAGVDEALTDMTSAAASLGSISSRIDLQSDFVNKLSDSIDSGVGRL 353

Query: 336 RDTDYARETTAMTKAQILQQASTSVLAQAKQSPSAALSL 374
            D D   E+T +   Q  QQ +   L+ A       LSL
Sbjct: 354 VDADMNEESTRLKALQTQQQLAIQALSIANSDSQNVLSL 392