Pairwise Alignments

Query, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Flagellin-like (NCBI) from Rhodospirillum rubrum S1H

 Score =  134 bits (338), Expect = 2e-36
 Identities = 115/376 (30%), Positives = 175/376 (46%), Gaps = 87/376 (23%)

Query: 5   VNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDMA 64
           + TN SA +A RYLN  A     S+ R++SG KIN A DDA+GL ++ +L +    L+ A
Sbjct: 4   ITTNTSANSALRYLNMNAAEQTNSLNRIASGSKINRASDDASGLAVATKLQTNVSTLNQA 63

Query: 65  VKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALNDELN 124
             NA+   SI QTA+G +++ ++ILQRM+ L  QS +G+ +++ER  I  E   L  E++
Sbjct: 64  ATNASHATSILQTADGGLSQISDILQRMKTLTAQSISGAVTNTERAYINAEYDQLVKEID 123

Query: 125 RIAETTSFGGNKLLNGSFG--SKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYRAQEGK 182
            I  +T+F G++LL G+    S SF +G ++G     S  +  SD               
Sbjct: 124 SIVASTTFNGDQLLKGTGAGYSGSFLVGTNAG----TSGSTANSD--------------- 164

Query: 183 AADWRVGAATDLTLSYTNKQGEAREVTINAKQGDDLEELATYINGQT---EDVKASVGED 239
             D ++ + T L            + T NA  G DL E   Y +G T   ED+ A+    
Sbjct: 165 IIDIKITSGTTL-----------GDGTFNAVAGLDL-ETTLYKSGATTNKEDIDAA---- 208

Query: 240 GKLQLFASSQKVNGDVTIGGGLGGEIGFDAGRNVTVADVNVSTVAGSQEAVSILDGALKA 299
              QL A                           T  D  +S VAG+             
Sbjct: 209 ---QLAA---------------------------TAIDKAISAVAGA------------- 225

Query: 300 VDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMTKAQILQQASTS 359
               RA +GA  +RF    + + +  EN++A++S I D D A+E +  + AQ+   A+ +
Sbjct: 226 ----RADVGAQMSRFQFQAAQIASSTENLDAAQSAITDADVAKEQSNFSSAQVKTNAAIA 281

Query: 360 VLAQAKQSPSAALSLL 375
            L+QA Q P   L LL
Sbjct: 282 ALSQANQMPQQLLQLL 297