Pairwise Alignments

Query, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., flagellin/flagellar hook associated protein from Dechlorosoma suillum PS

 Score =  148 bits (373), Expect = 2e-40
 Identities = 84/183 (45%), Positives = 120/183 (65%), Gaps = 12/183 (6%)

Query: 1   MAINVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRG 60
           MA+ VNTN+S++ AQR L  +   +  S++RLSSG ++NSA+DDAAG  I+  LTS  RG
Sbjct: 1   MALIVNTNISSLNAQRNLATSNQSLSVSLQRLSSGLRVNSAKDDAAGSAIAEGLTSAIRG 60

Query: 61  LDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALN 120
            + +++NANDGIS+ QTAEGA+ +  N LQR+R++++Q+SNGS S + R  +Q+EV  L 
Sbjct: 61  GNQSIRNANDGISVGQTAEGALGQIANNLQRIREISVQASNGSISDTNRSQLQKEVDQLT 120

Query: 121 DELNRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYRAQE 180
            E++RI +TT F G KLL+G+  + +FQ+G  SG A          D Q     S  AQ 
Sbjct: 121 QEISRIVQTTEFNGTKLLSGA-STITFQVGF-SGSA----------DNQVSVDTSNLAQN 168

Query: 181 GKA 183
           G A
Sbjct: 169 GAA 171



 Score = 97.8 bits (242), Expect = 3e-25
 Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 31/287 (10%)

Query: 112 IQEEVSALNDELNRIAETTSFGGN--KLLNGSFGSKSFQIGADSGEAVMLSMGSMRSDTQ 169
           +   +S+LN + N      S   +  +L +G   + +    A S  A  L+  ++R   Q
Sbjct: 5   VNTNISSLNAQRNLATSNQSLSVSLQRLSSGLRVNSAKDDAAGSAIAEGLT-SAIRGGNQ 63

Query: 170 AMGGKSYRAQEGKAADWRVGAATDLTLSYTNKQGEAREVTINAKQGD----DLEELATYI 225
           ++   +     G+ A+  +G          N     RE+++ A  G     +  +L   +
Sbjct: 64  SIRNANDGISVGQTAEGALG-------QIANNLQRIREISVQASNGSISDTNRSQLQKEV 116

Query: 226 NGQTEDVKASVG--EDGKLQLFASSQKVNGDVTIGGGLGGEIGFD--------------- 268
           +  T+++   V   E    +L + +  +   V   G    ++  D               
Sbjct: 117 DQLTQEISRIVQTTEFNGTKLLSGASTITFQVGFSGSADNQVSVDTSNLAQNGAAGLNAY 176

Query: 269 AGRNVTVADVNVSTVAGSQEAVSILDGALKAVDSQRASLGAFQNRFGHAISNLDNVNENV 328
           +G       VNV+T  G+  A++ LD  +  + + RA+ G+ QNRF   +SNL N  EN+
Sbjct: 177 SGTLTATGTVNVTTSGGASAAINKLDADIAQIANIRATFGSVQNRFEAVVSNLQNYVENL 236

Query: 329 NASRSRIRDTDYARETTAMTKAQILQQASTSVLAQAKQSPSAALSLL 375
           +AS+SR+ D D+A ET  +T+ QILQQA T++LAQA   P  AL+LL
Sbjct: 237 SASKSRLIDADFAAETAQLTRNQILQQAGTAILAQANTVPQGALTLL 283