Pairwise Alignments

Query, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., flagellin (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  108 bits (270), Expect = 2e-28
 Identities = 59/144 (40%), Positives = 86/144 (59%)

Query: 1   MAINVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRG 60
           M++ +N N+ AM A   L+ +   +  S+ RLSSG ++ +A DDAAGL I   + S    
Sbjct: 1   MSLVINHNMMAMNAAGNLSNSYGKLSTSVRRLSSGLRVGTAADDAAGLAIRELMRSDISA 60

Query: 61  LDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALN 120
           L+  V+NAND IS+ QTA+GA+      L RM++LA Q++ G+ +S +R  I  E  A+ 
Sbjct: 61  LNQGVRNANDAISLIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMA 120

Query: 121 DELNRIAETTSFGGNKLLNGSFGS 144
            E+ RIA  T F G  LLNG+  S
Sbjct: 121 SEITRIANATDFNGLHLLNGNLSS 144



 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 57/181 (31%), Positives = 91/181 (50%), Gaps = 7/181 (3%)

Query: 202 QGEAREVT--INAKQGDDLEELATYINGQTEDVKASVGEDGKLQLFASSQKVNGD----V 255
           Q  A E+T   NA   + L  L   ++  T D  + +   GK+++   +   + +    V
Sbjct: 117 QAMASEITRIANATDFNGLHLLNGNLSSDTHD-GSGLQSTGKMKIHFGTANDSAEDYYYV 175

Query: 256 TIGGGLGGEIGFDAGRNVTVADVNVSTVAGSQEAVSILDGALKAVDSQRASLGAFQNRFG 315
            IG      +G         A   +ST + +Q+A+  +  A+ + D+ RASLGA QNR  
Sbjct: 176 QIGTSTASALGVGNQATAGSAGYTISTQSAAQQALVAIQNAIISKDNIRASLGALQNRLE 235

Query: 316 HAISNLDNVNENVNASRSRIRDTDYARETTAMTKAQILQQASTSVLAQAKQSPSAALSLL 375
           + ISNL    EN+ ++ SRI D D + E T   + QIL Q++ ++L+QA   P  A+ LL
Sbjct: 236 NTISNLRTQAENLQSAESRISDVDVSSEMTEFVRQQILTQSAVAMLSQANSLPRMAMQLL 295

Query: 376 G 376
           G
Sbjct: 296 G 296