Pairwise Alignments

Query, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., flagellin, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  105 bits (263), Expect = 1e-27
 Identities = 73/238 (30%), Positives = 117/238 (49%), Gaps = 11/238 (4%)

Query: 1   MAINVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRG 60
           M++ +N N+ A  A R L  +   +  S+ RLSSG ++ +A DDAAGL +   + +    
Sbjct: 1   MSLVINHNLMAQNASRNLGDSYTKLSTSVRRLSSGLRVGNAADDAAGLAVRELMRADIAA 60

Query: 61  LDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALN 120
           L   V+NAND IS+ QTA+GA+      L RM++LA Q++ G+ +S +R  I  E  A+ 
Sbjct: 61  LSQGVRNANDAISMIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMA 120

Query: 121 DELNRIAETTSFGGNKLLNGSF-GSKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYRAQ 179
            E+ RIA+ T F G  LLNG+  G      G  S   + +  G+    ++      Y  Q
Sbjct: 121 SEITRIAKMTDFNGVYLLNGNLSGDTHSGSGLQSTGKMKVHFGTANDSSE----DYYYVQ 176

Query: 180 EGKAADWRVGAATDLTLSYTNKQGEAREVTINAKQGDDLEELATYINGQTEDVKASVG 237
              A    +G  T+          +A  ++  +     LE L   I  + + ++AS+G
Sbjct: 177 INAATSSALGVGTE-----AGSTAKAYSISTQSAAQAALEGLTNAIVSK-DKIRASLG 228



 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 7/181 (3%)

Query: 202 QGEAREVTINAKQGD--DLEELATYINGQTEDVKASVGEDGKLQL-FASSQKVNGD---V 255
           Q  A E+T  AK  D   +  L   ++G T    + +   GK+++ F ++   + D   V
Sbjct: 117 QAMASEITRIAKMTDFNGVYLLNGNLSGDTHS-GSGLQSTGKMKVHFGTANDSSEDYYYV 175

Query: 256 TIGGGLGGEIGFDAGRNVTVADVNVSTVAGSQEAVSILDGALKAVDSQRASLGAFQNRFG 315
            I       +G       T    ++ST + +Q A+  L  A+ + D  RASLGA QNR  
Sbjct: 176 QINAATSSALGVGTEAGSTAKAYSISTQSAAQAALEGLTNAIVSKDKIRASLGALQNRLE 235

Query: 316 HAISNLDNVNENVNASRSRIRDTDYARETTAMTKAQILQQASTSVLAQAKQSPSAALSLL 375
           + ISNL    EN+ A+ SRI D D + E T   + QIL Q++ ++L+QA   P  AL+LL
Sbjct: 236 NTISNLQIQAENLQAAESRISDVDVSMEMTEFVRQQILSQSAVAMLSQANSLPRLALNLL 295

Query: 376 G 376
           G
Sbjct: 296 G 296