Pairwise Alignments

Query, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., flagellin (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  107 bits (268), Expect = 3e-28
 Identities = 59/141 (41%), Positives = 85/141 (60%)

Query: 1   MAINVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRG 60
           M++ +N N+ AM A R L  +   +  S  RLSSG ++N+A DDAAGL I   + +    
Sbjct: 1   MSLVINHNMMAMNAARNLTDSYGRLATSTRRLSSGLRVNTAADDAAGLAIRELMRADIST 60

Query: 61  LDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALN 120
           L   ++NAND IS+ QTA+GA+      L RM++LA Q++ G+ +S +R  I+ E  A+ 
Sbjct: 61  LRQGIRNANDAISMIQTADGALQIIDEKLIRMKELAEQAATGTYNSDQRLMIESEYQAMA 120

Query: 121 DELNRIAETTSFGGNKLLNGS 141
            E+ RIA  T F G  LLNGS
Sbjct: 121 SEITRIANATDFNGIHLLNGS 141



 Score = 80.9 bits (198), Expect = 4e-20
 Identities = 47/120 (39%), Positives = 69/120 (57%), Gaps = 6/120 (5%)

Query: 257 IGGGLGGEIGFDAGRNVTVADVNVSTVAGSQEAVSILDGALKAVDSQRASLGAFQNRFGH 316
           +G G    +G +AG         +ST + +Q A++ +D A+ + D  RASLGA QNR  +
Sbjct: 184 LGLGNASALGTEAG------GYTISTQSAAQAALAAIDQAIISKDKIRASLGALQNRLEN 237

Query: 317 AISNLDNVNENVNASRSRIRDTDYARETTAMTKAQILQQASTSVLAQAKQSPSAALSLLG 376
            ISNL    EN+ +S SRI D D A E T   + QIL Q++ ++L+QA   P  A+ L+G
Sbjct: 238 TISNLSIQAENLQSSESRISDVDVATEMTEFVRNQILTQSAVAMLSQANSLPQMAMKLIG 297