Pairwise Alignments

Query, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., flagellin FljJ from Caulobacter crescentus NA1000

 Score = 80.9 bits (198), Expect = 4e-20
 Identities = 49/165 (29%), Positives = 90/165 (54%), Gaps = 1/165 (0%)

Query: 1   MAINVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRG 60
           MA++VNTN  A+ A + LN   D MQ    R+++G  I++A+D+AA   I+    +    
Sbjct: 1   MALSVNTNQPALIALQNLNRTNDDMQAVQTRINTGEAISTAKDNAAVWSIAQAQRADMSA 60

Query: 61  LDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALN 120
           L     + +   SIA  A  A    +++L+ MR+  + + + S +++ R+A+  +   L 
Sbjct: 61  LGAVKMSLDRATSIADVALAAGESVSDLLKLMREKVVAAKDTSLTTTSRQALNADFQGLI 120

Query: 121 DELNRIAETTSFGGNKLLNGS-FGSKSFQIGADSGEAVMLSMGSM 164
             LN++  + +F G  LL+GS     SF   AD+G+A+ L++ ++
Sbjct: 121 KNLNQVLRSATFDGANLLDGSQAADMSFLADADAGQAITLTLQNL 165



 Score = 35.4 bits (80), Expect = 2e-06
 Identities = 40/191 (20%), Positives = 73/191 (38%), Gaps = 14/191 (7%)

Query: 187 RVGAATDLTLSYTNKQGEAREVTINAKQGDDLEELATYINGQTEDVKASVGEDGKLQLFA 246
           +V AA D +L+ T++Q    +     K  + +   AT+      D     G       F 
Sbjct: 95  KVVAAKDTSLTTTSRQALNADFQGLIKNLNQVLRSATFDGANLLD-----GSQAADMSFL 149

Query: 247 SSQKVNGDVTI---GGGLGGEIGFDAGRNVTVADVNVSTVAGSQEAVSILDGALKAVDSQ 303
           +       +T+      LGG I      N   A  ++     +   ++ LD  L AV+  
Sbjct: 150 ADADAGQAITLTLQNLSLGGTI------NTLTATDDILDPVNAAGVLTRLDATLSAVNQA 203

Query: 304 RASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMTKAQILQQASTSVLAQ 363
             ++G    +     + +  +N+ +      + D D A+E+  +   Q+ QQ     L+ 
Sbjct: 204 VGNIGTQAKQIDAHNTFVAKLNDVLETGVGNLVDADLAKESARLQALQVKQQLGAQALSI 263

Query: 364 AKQSPSAALSL 374
           A  +P   LSL
Sbjct: 264 ANGAPQIILSL 274