Pairwise Alignments

Query, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., flagellin domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  186 bits (472), Expect = 6e-52
 Identities = 94/184 (51%), Positives = 136/184 (73%), Gaps = 1/184 (0%)

Query: 1   MAINVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRG 60
           MAI VNTNV++M AQ+ LN ++ G+  SMERLSSG +INSA+DDAAGL ISNRL SQ RG
Sbjct: 1   MAITVNTNVTSMKAQKNLNTSSSGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60

Query: 61  LDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALN 120
           LD+ ++NAND ISIAQ AEGAM E TN+LQRMRDL +Q+ NG+NS+ +  AIQ+E++ L+
Sbjct: 61  LDVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEINQLS 120

Query: 121 DELNRIAETTSFGGNKLLNGSFGS-KSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYRAQ 179
           +E+  I ++T+FG   L+ G F + K+FQ+G   GE + +S+G+  + + ++   +  + 
Sbjct: 121 EEITAIGDSTAFGNTLLMTGLFSTGKTFQVGHQEGEDITISVGTTNAGSLSVNALAIASA 180

Query: 180 EGKA 183
            G++
Sbjct: 181 GGRS 184



 Score =  110 bits (276), Expect = 3e-29
 Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 12/189 (6%)

Query: 199 TNKQGEAREVTINAKQG----DDLEELATYINGQTEDVKASVGED---GKLQLFASSQKV 251
           TN     R++T+ A+ G    DDL+ +   IN  +E++ A +G+    G   L       
Sbjct: 86  TNMLQRMRDLTVQAENGANSTDDLDAIQKEINQLSEEITA-IGDSTAFGNTLLMTGLFST 144

Query: 252 NGDVTIGGGLGGEIGFDAGR----NVTVADVNVSTVAGSQEAVSILDGALKAVDSQRASL 307
                +G   G +I    G     +++V  + +++  G   A++ +D A+K +D+QRA+L
Sbjct: 145 GKTFQVGHQEGEDITISVGTTNAGSLSVNALAIASAGGRSTALANIDAAIKTIDNQRANL 204

Query: 308 GAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMTKAQILQQASTSVLAQAKQS 367
           GA QNR  + ISN  N   NV  ++SRI D D+A+ET+ MTK Q+LQQ  +++LAQA Q 
Sbjct: 205 GAKQNRLAYNISNSANTQANVADAKSRIVDVDFAKETSVMTKNQVLQQTGSAMLAQANQL 264

Query: 368 PSAALSLLG 376
           P  ALSLLG
Sbjct: 265 PQVALSLLG 273