Pairwise Alignments

Query, 666 a.a., flagellar hook-associated protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., flagellar hook-associated 2-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  125 bits (313), Expect = 5e-33
 Identities = 81/248 (32%), Positives = 136/248 (54%), Gaps = 6/248 (2%)

Query: 418 FDGYGGMTEVQSAQDSMVVLDGVATLSSNNNIIENAIEGVNLTLKGKTDRNQPPAEIGIE 477
           F+G   ++E+Q AQD++  +D    ++S +N ++ AI GV L L  K D  +    + I 
Sbjct: 203 FNG-ASLSELQPAQDAIFYVDN-QKITSGSNEVKGAITGVTLELT-KADIGEV-GTLTIS 258

Query: 478 YDRERVRNDIEQFVAAYNQFFQTSKELAGVDPRTGQAGPLAGDSIVRSADSRLKTVFSSS 537
            D E V+ ++  FV AYN    +  +L+  D    +A  L GDS++RS +S+L+ + S  
Sbjct: 259 QDDEAVKANVTGFVDAYNALLDSINKLSSYDADKKKAAALQGDSMIRSLESQLRKMISER 318

Query: 538 IEQAPENLKSLTEFGITTTRQGTLEINYAMLDRQLNNNFTKL-GEFFGGNQGFAKRVEDA 596
           ++   E + +L + GI T R G LEI+ A LD+ ++ + + L G F   N G A R+ D 
Sbjct: 319 VDVNGETV-ALYDMGIKTDRYGKLEIDSAKLDKAISEDMSSLEGLFSTTNTGLANRLSDL 377

Query: 597 ISSMTGVTGSIRTREKSLNEQTYRLDDDQRSLDRRMESLEKRTHAKFSAMQDATSKMQSQ 656
            S+ T   G I TR  + N +  RLDD + +  R+M++L+ R   +F+AM    + +  Q
Sbjct: 378 ASTYTKAGGVISTRNDTYNSEKQRLDDQREAFTRKMDALQTRLFKQFNAMDLVVASLNQQ 437

Query: 657 LAGMMNAL 664
             G+++ L
Sbjct: 438 TTGLIDRL 445



 Score =  103 bits (258), Expect = 1e-26
 Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 1/202 (0%)

Query: 1   MSLGPMGMNTGFDINGMVSKIVSAERVPKQQRIDNERTNIDTSISAYGRLRESLDTMKNL 60
           M+L   G+ +   IN MVS IV+AE+ PK+   +     I+  +SA G L+  L   ++ 
Sbjct: 1   MALTATGIGSNLPINDMVSAIVNAEKAPKEALFNRTEDTINAKVSAIGTLKSELAKFQDA 60

Query: 61  MTQFRQEKAFAVRKVDTSNEQVVSATATTEAIAGNYSVDVLQLAQSHKIA-SEVLDKDAK 119
           + + ++    ++RKV T +     ATA   A +G YS+ V QLA SHK+A +        
Sbjct: 61  LKKLQKGSELSIRKVTTGDSLFFKATADKFAQSGTYSIKVEQLAFSHKVAGTNTSAATDT 120

Query: 120 FGPGKLHISLGDKSFTLDVQGNSKLVDIVRGINGEKSNPGVRASIINDVEGPRLIVASNV 179
            G G+L  ++  +SF +DV     L  I + IN    N GV A++I    G RL+ +S  
Sbjct: 121 VGEGRLDFTVNGESFGVDVDAADDLNAIAKKINDASDNKGVIATVITSDAGSRLVFSSEA 180

Query: 180 SGKDHSVKMSAQAEPGNPLKQL 201
           +G  + V + A    G  L  +
Sbjct: 181 TGTANQVSVIATDTTGTGLNDM 202