Pairwise Alignments

Query, 666 a.a., flagellar hook-associated protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., Flagellar hook-associated protein 2 (FliD, filament cap protein) (NCBI) from Rhodospirillum rubrum S1H

 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 10/177 (5%)

Query: 10  TGFDINGMVSKIVSAERVPKQQRIDNERTNIDTSISAYGRLRESLDTMKNLMTQFRQEK- 68
           +GFD + ++   V+A   P    +D    +  T ++++  +   L  + + +      K 
Sbjct: 26  SGFDSSALIKAAVNARMQPAYT-LDAAIKDAGTKVTSWQEMLTDLTAISDSLKPLSSAKG 84

Query: 69  -------AFAVRKVDTSNEQVVSATATTEAIAGNYSVDVLQLAQSHKIASEVLDKDAKFG 121
                  A+      T+    V+AT T  A AG Y V + +LA +HK+A+  +      G
Sbjct: 85  AVYSTFTAYLNSSTLTTPSSYVAATVTDGAAAGIYDVKIERLATTHKVAANAVATATTVG 144

Query: 122 PGKLHISLGD-KSFTLDVQGNSKLVDIVRGINGEKSNPGVRASIINDVEGPRLIVAS 177
           PG   +  G  +  T+ +   + L D+ + IN + +  GV A+++   +    +V S
Sbjct: 145 PGSFTLKAGTAEGATITLDKATSLSDLAKAINAQSATSGVSATLVKTSDNQSTLVLS 201



 Score = 51.6 bits (122), Expect = 9e-11
 Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 7/163 (4%)

Query: 422 GGMTEVQSAQDSMVVLDGVATLSSNNNIIENAIEGVNLTLKGKTDRNQPPAEIGIEYDRE 481
           G  T    +  + + +DGV T++S+ N I++ + GV+L L   T       EIG   D  
Sbjct: 226 GDFTVDGESLKAKLTIDGV-TVTSSTNDIKDLVPGVSLNLYAATGTGSITLEIG--QDLS 282

Query: 482 RVRNDIEQFVAAYNQFFQTSKELAGVDPR-TGQAGPLAGDSIVRSADSRLKTVFSSSIEQ 540
            ++  +E FV A+N +   +      D         L GD ++RSA+S    +F +    
Sbjct: 283 ALKKQVETFVKAFNAYRTFALTQQATDENGAADTAILFGDGLLRSANS---AIFDAINAN 339

Query: 541 APENLKSLTEFGITTTRQGTLEINYAMLDRQLNNNFTKLGEFF 583
                 +L  FGIT      LEI+ A L + L  +   +  FF
Sbjct: 340 TKVGGVTLANFGITMGTGNMLEIDDAALQKALLQDPKAIQAFF 382