Pairwise Alignments

Query, 666 a.a., flagellar hook-associated protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., flagellar capping protein from Dechlorosoma suillum PS

 Score = 90.5 bits (223), Expect = 1e-22
 Identities = 77/331 (23%), Positives = 145/331 (43%), Gaps = 20/331 (6%)

Query: 341 TASGTLLDSYVTPQEAQQKLEQKLAQEKAQIEAAIRSGKMTPEE-AKAQ---ARAKLSPE 396
           +A G   D  +T  ++ + +  K+            SGK   +  AKA    A    +P+
Sbjct: 129 SAGGKSFDIALTASDSLETIRDKI-----NAATVTESGKTATQSLAKASVINAGTSAAPQ 183

Query: 397 ERAYIEQVEKAQAALNAAQSAFD-GYGGMTEVQSAQDSMVVLDGVATLSSNNNIIENAIE 455
            +  I   ++      +  +A +   GG T+ Q A+++ + L+G+    S N I +  ++
Sbjct: 184 YKLVIASTKQGVDNAVSIDAALETALGGFTQTQDAKNAKLSLNGLEVERSTNTITD-VVD 242

Query: 456 GVNLTLKGKTDRNQPPAEIGIEYDRERVRNDIEQFVAAYNQFFQTSKELAGVDPRTGQAG 515
           GV L L            + +  D E +   I  F++AYN+   T      V+ +  + G
Sbjct: 243 GVTLNLASADSTKT--VNLTVARDTEAITKKINDFISAYNKLAST------VNSQHQKGG 294

Query: 516 PLAGDSIVRSADSRLKTVFSSSIEQAPENLKSLTEFGITTTRQGTLEINYAMLDRQLNNN 575
            L  D+   S   +L+ VF+   + A  +L  L + GI+  + GTL ++     + L  N
Sbjct: 295 TLEADNSATSVIYQLQNVFNDPAKIAGNDLNYLAQVGISFKKDGTLSLDSTAFTKALETN 354

Query: 576 FTKLGEFFGGNQ-GFAKRVEDAISSMTGVTGSIRTREKSLNEQTYRLDDDQRSLDRRMES 634
              +   F   + GFA R+ D  S+M    G + +R K LN +   LD +    + R+E+
Sbjct: 355 SGNVVSLFTDTERGFAHRLYDTASNMLTNDGLVDSRIKGLNSRIKILDTNMERENVRLEN 414

Query: 635 LEKRTHAKFSAMQDATSKMQSQLAGMMNALG 665
           +E R   +++ +      M++  + + + LG
Sbjct: 415 METRLRRQYANLDSLMGTMKNTSSYLTSLLG 445



 Score = 86.3 bits (212), Expect = 3e-21
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 15/207 (7%)

Query: 1   MSLGPMGMNTGFDINGMVSKIVSAERVPKQQRIDNERTNIDTSISAYGRLRESLDTMKNL 60
           M +   G+ +G D+N +VS+++  ER P       ++T  D  +SA+G+++  LD  K  
Sbjct: 1   MGISSAGIGSGLDVNSLVSQLLQLERQPLNSLTAKKQTFND-QLSAFGKVKSDLDAFKTA 59

Query: 61  MTQFRQEKAFAVRKVDTSNEQVVSATATTEAIAGNYSVDVLQLAQS--HKIASEVLDKDA 118
           ++  + +  FA  K  +SN  +++ATAT  A  G+Y + + QLAQ+     A++   K A
Sbjct: 60  VSGLKLDMDFAAAKATSSNTSLLNATATNTATPGSYDIKISQLAQAGVRASAAQTDSKAA 119

Query: 119 KFGPGKLHISLGDKSFTLDVQGNSKLVDIVRGIN-------GEKSNPGV-RASIINDVEG 170
               G   +S G KSF + +  +  L  I   IN       G+ +   + +AS+IN    
Sbjct: 120 VGADGTFTLSAGGKSFDIALTASDSLETIRDKINAATVTESGKTATQSLAKASVINAGTS 179

Query: 171 P----RLIVASNVSGKDHSVKMSAQAE 193
                +L++AS   G D++V + A  E
Sbjct: 180 AAPQYKLVIASTKQGVDNAVSIDAALE 206