Pairwise Alignments

Query, 666 a.a., flagellar hook-associated protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., flagellar hook-associated 2 domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 68.6 bits (166), Expect = 8e-16
 Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 13/173 (7%)

Query: 7   GMNTGFDINGMVSKIVSAERVPKQQRIDNERTNIDTSISAYGRLRESLDTMKNLMTQFRQ 66
           G+  G D + ++ ++ S E++P Q+R+   + +      A+G LR  + ++K+++     
Sbjct: 13  GLGNGTDFSKVIDQLKSIEQIP-QKRLTLWKADWQRRQDAFGELRTEIASLKDIVDSMST 71

Query: 67  EKAFAVRKVDTSNEQVVSATATTEAIAGNYSVDVLQLAQSHKIASEVLDKDAKFGPGKLH 126
              F V+   +S E V SAT  +  + GNY ++V QLA S          D K    K++
Sbjct: 72  MNKFLVKTGSSSAETVASATTDSSVLEGNYKIEVGQLASSSIWTYNTAFADKK---TKVN 128

Query: 127 ISLGDKSFTLDVQGNSKLVDIVRG---------INGEKSNPGVRASIINDVEG 170
            S  D+ F     G ++ + +  G         IN +  NPGV+A ++ +  G
Sbjct: 129 DSGSDQQFVYTYMGKTRSITVPSGTTIDALKNMINNDPQNPGVKAMLVQNGTG 181



 Score = 54.3 bits (129), Expect = 2e-11
 Identities = 64/298 (21%), Positives = 118/298 (39%), Gaps = 64/298 (21%)

Query: 427 VQSAQDSMVVLDG---VATLSSNNNIIENAIEGVNLTLKGKTDRNQPPAEIGIEYDRERV 483
           VQ++Q++   ++G      L S +N +  A+EG+ LTLK     +    +I +  D E++
Sbjct: 217 VQASQNAKYRVNGWPAATWLESASNTLTGAVEGMTLTLK-----DVGTTQISVATDTEKI 271

Query: 484 RNDIEQFVAAYNQFFQTSKELAGVDPRTGQAGPLAGDSIVRSADSRLKT------VFSSS 537
           + +++ FV A N      KEL  V+       P    S+       + T      + S+ 
Sbjct: 272 KENVKSFVDAMNAVRSKIKELTAVNSSKDVDNPDDASSLYSMQKGSILTGNYGVQLLSTQ 331

Query: 538 IEQAP-------------------ENLKSLTEFGITTTRQ------GTLEINYAMLDRQL 572
           ++ A                    +   SL   GI T  +      G LE++ A LD  L
Sbjct: 332 LKMATADRAAGFEYQYKDGNLLRGDEFSSLAHIGILTNAETNSLNAGLLELDEAKLDEVL 391

Query: 573 NNNFTKLGEFFGGN----------------QGFAKR--------VEDAISSMTGVTGSIR 608
            NN T + E F  +                +G  K         V+ + + +    G  R
Sbjct: 392 KNNPTAVAELFAADGLPESDSSDFSYYSHVKGVTKAGIYDVTYDVDASGNIVNAFIGGKR 451

Query: 609 TREKSLNEQTYRLDDDQRSLDRRMESLEKRTHA-KFSAMQDATSKMQSQLAGMMNALG 665
               + N+Q   ++ D R L  ++++L + ++A +    +   S +  QL+ M+ + G
Sbjct: 452 ANIDNANKQITAMEGDARGLALQIDNLSQGSYASRMRIKEGKLSGLSEQLSDMLGSDG 509