Pairwise Alignments

Query, 666 a.a., flagellar hook-associated protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 662 a.a., flagellar hook-associated 2 domain protein from Marinobacter adhaerens HP15

 Score =  110 bits (274), Expect = 3e-28
 Identities = 152/703 (21%), Positives = 284/703 (40%), Gaps = 112/703 (15%)

Query: 2   SLGPMGMNTGFDINGMVSKIVSAERVPKQQRIDNERTNIDTSISAYGRLRESLDTMKNLM 61
           S+  +G+ +G   + +V ++V+AER P ++R+  +     + ISAYG+LR ++  ++  M
Sbjct: 3   SISSLGIGSGVLTSDLVDQLVAAERAPTEERLTQKTEQTQSLISAYGKLRSAITELRLPM 62

Query: 62  TQFRQEKAFAVRKVDTSNEQVVSATATTEAIAGNYSVDVLQLAQSHKIASE--VLDKDA- 118
            Q             +SNE++  +  +T+A  G YSV+V  LA +  +AS     D+DA 
Sbjct: 63  RQLSAPDNLKAFSASSSNEEISVSVDSTKASRGTYSVEVTSLAGAQALASRDVFADRDAT 122

Query: 119 KFGPGKLHISLGDK--SFTLDVQGNSKLVDIVRGINGEKSNPGVRASIINDVEGPRLIVA 176
             G G+L +++GDK  S T+D   N  L  +   IN   S+ GV A +I+  +G +L+++
Sbjct: 123 SVGQGRLTLNVGDKTTSITID-SSNDTLQGLANAIN--DSDAGVSAGVIDTGDGFQLVLS 179

Query: 177 SNVSGKDHSVKMSAQAE---PGNPLKQLEYKTLEQRVRDLEKARAQAQQLIAPLTPEQQK 233
           ++ +G  ++V ++   +    G   + L        +     A +  ++ IA      + 
Sbjct: 180 ADETGTANAVSIAVADDSVGTGTDNQGLSRFAFNSGM----DADSGLRETIAATDAVMEI 235

Query: 234 VAAKVAEKIGDAARLVDQ-------------EVAQEIRSAAQSAQGAAGEALNAGELTES 280
              ++         ++D              +V Q++ +     QG   +  NA + T  
Sbjct: 236 NGVEITRATNSFENVIDGLTFDLTATGSSVIKVQQDLGAVTDRVQGFV-DKFNALQSTID 294

Query: 281 AVKAAANAASEAKKYIRPEDRIPGWTETASGTLLDSYWEPEEELDAQGQKKAADVPGWSN 340
           ++ A  NA                  E   G+LL          +   Q     VPG  N
Sbjct: 295 SL-AGFNA------------------EAGVGSLLTGDSTVRSIQNQLRQVLTRVVPGLEN 335

Query: 341 TASGTLLDSYVTP-------QEAQQKLEQKLAQEKAQIEAAIRSGKMTPEEAKAQARAKL 393
           +A  +L D  +T        +  + + E++L      + A       T +      R+ L
Sbjct: 336 SAVRSLADVGITTNFETGGLEFDRARFEEQLKANPDDVTALFAEQGRTTDSQVEFVRSGL 395

Query: 394 SPEERAYIEQVEKA--QAALNAAQSAFDG-------------YGGMTEV------QSAQD 432
           + E   Y   + +A  Q  L A  +  DG               G T V      Q+   
Sbjct: 396 NTEPGKYDINITRAATQGTLVAGSALADGIVIDDSNDELTFKVNGETSVSVQLTQQTYGS 455

Query: 433 SMVVLDGVATLSSNNNIIENAIEGVNLTLKGKTDRNQPPAEIGIEYDRERVRNDIEQFVA 492
           +  ++D + +  ++NN +  A   V + L G  +     A+ G   D   V  +  +  A
Sbjct: 456 AQELVDEIQSQLNSNNALNAAGTSVQVELDGSGNLRFTSADYG---DESAVSLESAENSA 512

Query: 493 AYNQFFQTSKELAGVDPRTGQAGPLAGDSIVRSADSRLKTVFSSSIEQAPENLKSLTEFG 552
            +     ++ E AG+D     AG + G    R+A+   + +F  +       L+ +   G
Sbjct: 513 VFG--LDSATETAGLD----VAGTIGG----RAAEGDGQVLFLGNGNGGASGLQ-VRILG 561

Query: 553 ITTTRQGTLEINYAMLDRQLNNNFTKLGEFFGGNQGFAKRVEDAISSMTGVTGSIRTREK 612
             T  +G++                         +G A+R  D +SS  G  G+I +R +
Sbjct: 562 DETGARGSITF----------------------VEGVAERTVDLVSSFVGADGAIESRTE 599

Query: 613 SLNEQTYRLDDDQRSLDRRMESLEKRTHAKFSAMQDATSKMQS 655
           SLN    ++   Q  L+ R+ +  +R  ++F+A     S++ S
Sbjct: 600 SLNRDLEQIQASQARLEERIAAYRERLVSQFTAADSLISQLNS 642