Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  247 bits (631), Expect = 5e-70
 Identities = 129/242 (53%), Positives = 166/242 (68%), Gaps = 1/242 (0%)

Query: 137 LVGQSMGIQEVRHLIEQVSTTEANVLILGESGTGKEVVARNIHYHSGRRNGPFVPINCGA 196
           L+G S  I+E+R L+ +++  E+ VLI GESGTGKE+VAR +H  S RRN PF+ INCGA
Sbjct: 138 LLGDSKPIRELRKLLSKLAPAESPVLIRGESGTGKELVARTLHCQSHRRNKPFIAINCGA 197

Query: 197 IPAELLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGDMPMSMQVKLLRVLQER 256
           IP  L++SELFGHEKGAFTGA   + GR E A GGTLFLDEIGD+P+ +Q  LLR LQE+
Sbjct: 198 IPEHLIQSELFGHEKGAFTGAHQRKIGRIEAAHGGTLFLDEIGDLPLELQANLLRFLQEK 257

Query: 257 CFERVGGNSTIKANVRVIAATHRNLEEMIDGQKFREDLYYRLNVFPIEMPALRDRIDDIP 316
             ERVGG+  I  +VRV+AATH +LE  I+ ++FREDLYYRLNV  + M  LR+R  D+ 
Sbjct: 258 HIERVGGSQPIAVDVRVLAATHVDLEAAIEHKRFREDLYYRLNVLQVVMAPLRERHGDLA 317

Query: 317 LLLQELMTRMEAE-GAQPICFTPRAINSMMEHDWPGNVRELANLVERMVILYPNSLVDVN 375
           +L          E G +P  F+  A+ +M  HDWPGNVRELAN V R ++L     ++  
Sbjct: 318 MLASHFSHFYSQETGRRPRSFSDDALVAMGMHDWPGNVRELANRVRRGLVLAEGRQIEAR 377

Query: 376 HL 377
            L
Sbjct: 378 DL 379