Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

 Score =  246 bits (629), Expect = 9e-70
 Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 1/238 (0%)

Query: 136 SLVGQSMGIQEVRHLIEQVSTTEANVLILGESGTGKEVVARNIHYHSGRRNGPFVPINCG 195
           +++G+S  IQ V  ++ +V++T  NVL+LGESGTGKEV A ++H  SGR   PFV INC 
Sbjct: 148 NVIGESAAIQAVCQMVRRVASTTVNVLLLGESGTGKEVFAHSLHQLSGRAGQPFVAINCA 207

Query: 196 AIPAELLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGDMPMSMQVKLLRVLQE 255
           AIP  LLESELFGHEKGAFTGA+    G+ + A GGTLFLDEIGDMP  +Q KLLR LQ 
Sbjct: 208 AIPENLLESELFGHEKGAFTGALRQTTGKIQQANGGTLFLDEIGDMPPPLQAKLLRFLQS 267

Query: 256 RCFERVGGNSTIKANVRVIAATHRNLEEMIDGQKFREDLYYRLNVFPIEMPALRDRIDDI 315
           R  ERVGG  +++ +VR+++AT+R+L  +I+  +FREDLYYRL+   I +P LRDRI+D 
Sbjct: 268 RVIERVGGRQSLEVDVRIVSATNRDLGALIEKGEFREDLYYRLDEVKIALPPLRDRIEDA 327

Query: 316 PLLLQELMTRMEAE-GAQPICFTPRAINSMMEHDWPGNVRELANLVERMVILYPNSLV 372
           PLL Q  +    A  G +   F+  A  ++  H WPGNVREL N V+R V+L    LV
Sbjct: 328 PLLAQYFLDSFAASMGRKVTGFSSDAQVALSAHPWPGNVRELENRVKRAVVLAEGRLV 385