Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., Transcriptional Regulator, NifA subfamily, Fis Family (NCBI) from Rhodospirillum rubrum S1H

 Score =  278 bits (711), Expect = 3e-79
 Identities = 158/351 (45%), Positives = 209/351 (59%), Gaps = 48/351 (13%)

Query: 136 SLVGQSMGIQEVRHLIEQVSTTEANVLILGESGTGKEVVARNIHYHSGRRNGPFVPINCG 195
           +++G S  +QEV  LI +V+ T+A VLILGESG GKE+VA  IHY+     GPF+  NC 
Sbjct: 219 NIIGTSKPMQEVYDLIHKVAMTKATVLILGESGVGKELVASAIHYNGATAEGPFIKFNCA 278

Query: 196 AIPAELLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGDMPMSMQVKLLRVLQE 255
           A+P  L ESELFGHEKGAFTGAI  RKGRFE+A+GGT+FLDE+G++ ++MQ KLLRVLQE
Sbjct: 279 ALPESLGESELFGHEKGAFTGAIAQRKGRFEMADGGTIFLDEVGELSLAMQAKLLRVLQE 338

Query: 256 RCFERVGGNSTIKANVRVIAATHRNLEEMIDGQKFREDLYYRLNVFPIEMPALRDRIDDI 315
           + FERVGG  +++ +VR+IAAT+RNL EM++   FREDL+YRLNVFPI +P LRDR  D+
Sbjct: 339 KTFERVGGGRSVRVDVRIIAATNRNLPEMVEKGTFREDLFYRLNVFPITLPPLRDRGSDV 398

Query: 316 PLLLQELMTRMEAEGAQPI--CFTPRAINSMMEHDWPGNVRELANLVERMVILYPNSLVD 373
            LL+   + R  AEG +      TP A+  +M + WPGNVREL N++ER VIL  + ++ 
Sbjct: 399 ILLVDHFIARHAAEGGREAKRVSTP-ALTMLMAYHWPGNVRELENVIERSVILSEDGVIH 457

Query: 374 VNHLPTKYRYSDIPEFQPEPSRFSSVEEQERDVLEGIFAEDFNFEEPQEFVPDIDAPQAL 433
             +LP        P  Q      +S                                   
Sbjct: 458 GYNLP--------PSLQTATETGTSF---------------------------------- 475

Query: 434 PPEGVNLKELLADLEVNLINQALEAQGGVVARAADMLGMRRTTLVEKMRKY 484
              G  L+  L  +E  +I +AL+  GG    AA  LG+ R  L  +M KY
Sbjct: 476 ---GCGLEAKLQAVEYEMIVEALKTHGGNATEAAKELGLTRRILGLRMEKY 523