Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 733 a.a., Transcriptional Regulator, NifA subfamily, Fis Family (NCBI) from Rhodospirillum rubrum S1H

 Score =  259 bits (661), Expect = 3e-73
 Identities = 161/389 (41%), Positives = 229/389 (58%), Gaps = 32/389 (8%)

Query: 105 QLSDALRHCKEFLGRKGFQVLATARKNTLFRSLVGQSMGIQEVRHLIEQVSTTEANVLIL 164
           +L D L    + L ++ + +    R+   F  ++G S  I+ V   +E V+ +++ VLIL
Sbjct: 355 RLKDQLSRENKQLAKERYYLEEEIRRTEDFGDIIGISPAIRGVLEQVELVADSDSTVLIL 414

Query: 165 GESGTGKEVVARNIHYHSGRRNGPFVPINCGAIPAELLESELFGHEKGAFTGAITARKGR 224
           GE+GTGKE++AR IH  S R+    + +NC AIP+ LLES+LFGHEKGAFTGAI  + GR
Sbjct: 415 GETGTGKELIARAIHMLSQRKKRTMIKVNCAAIPSALLESDLFGHEKGAFTGAIAQKSGR 474

Query: 225 FELAEGGTLFLDEIGDMPMSMQVKLLRVLQERCFERVGGNSTIKANVRVIAATHRNLEEM 284
           FELA+ GTLFLDE+GD+P+ +Q KLLR LQER  ERVGG+  I  +VR+IAAT+R+L  M
Sbjct: 475 FELADRGTLFLDEVGDIPIDLQPKLLRALQEREIERVGGHQPIPVDVRMIAATNRDLTGM 534

Query: 285 IDGQKFREDLYYRLNVFPIEMPALRDRIDDIPLLLQELMTRMEAEGAQPI-CFTPRAINS 343
           ++ + FR DLYYRLNVFPI +P LR+R +DIPL+    M +   +  + I  F+   ++ 
Sbjct: 535 VEKRLFRGDLYYRLNVFPILIPPLRERREDIPLMADYFMRKTARKMNRAIEAFSAETMDM 594

Query: 344 MMEHDWPGNVRELANLVERMVILYPNSLVDVNHLP-TKYRYSDIPEFQPEPSRFSSVEEQ 402
           ++   WPGNVREL N++ER VIL    ++   HLP T+ R+   P               
Sbjct: 595 LLNLPWPGNVRELQNVIERAVILTKGPVL---HLPATELRHHLAPS-------------- 637

Query: 403 ERDVLEGIFAEDFNFEEPQEFVPD-IDAPQALPP---EGVNLKELLAD-LEVNLINQALE 457
                  + +ED         +P    AP  LPP      N  +L  + +E + I + L 
Sbjct: 638 -----AALPSEDAVIPLRAAVLPSAASAPDPLPPPAGSSPNPGDLAGEAIERDQILRVLR 692

Query: 458 AQGGVVA---RAADMLGMRRTTLVEKMRK 483
              G+V     AA  LGM+RTTL+ +MR+
Sbjct: 693 ETNGIVGGPRGAAAHLGMKRTTLLSRMRR 721