Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  245 bits (625), Expect = 3e-69
 Identities = 149/376 (39%), Positives = 219/376 (58%), Gaps = 14/376 (3%)

Query: 2   QSLAKLLVIEDDAAIRLNLSVILEFVGEQCEVIESTQIDQINWSAVWGGCILGSLR---- 57
           Q   ++L++EDD  +RL     L+        ++S +  +   +  + G ++  +R    
Sbjct: 4   QDSLQVLLVEDDPDVRLGCEQALQLEDIPVSSVDSAEKARRRLTRDFPGIVVSDIRLPGM 63

Query: 58  -GQALSEQLIQSLTKANHIPLLVANKQPYSLEEFPNYVGELDF---PLNYPQLSDALRHC 113
            G AL ++L Q++     + +L+      SL       G  DF   P +   L + +R  
Sbjct: 64  DGMALLKEL-QAIDPELPV-VLITGHGDVSLAVQAMKGGAHDFIEKPFSPDYLVEVVRRA 121

Query: 114 --KEFLGRKGFQVLATAR-KNTLFRSLVGQSMGIQEVRHLIEQVSTTEANVLILGESGTG 170
             K  L  +  Q+ A    ++TL   L+G+S  + +VR L+  +  + A++LI GE+GTG
Sbjct: 122 LDKRRLTLEVRQLRARLESRDTLEARLIGRSPAMVKVRQLVADLGNSAADILIFGETGTG 181

Query: 171 KEVVARNIHYHSGRRNGPFVPINCGAIPAELLESELFGHEKGAFTGAITARKGRFELAEG 230
           KE+ AR +H    RRNG FV INCG +P  L ESE+FGHE GA+TGA   R G+ E A G
Sbjct: 182 KELAARCLHEAGPRRNGNFVAINCGGLPETLFESEIFGHEAGAYTGAAKKRIGKIEHASG 241

Query: 231 GTLFLDEIGDMPMSMQVKLLRVLQERCFERVGGNSTIKANVRVIAATHRNLEEMIDGQKF 290
           GTLFLDEI  MPM+MQ+KLLRVLQER  ER+G N+ I  + RVIAAT  +L+E+ D  +F
Sbjct: 242 GTLFLDEIESMPMAMQIKLLRVLQERSLERLGSNTPIPVDCRVIAATKADLKELSDQGRF 301

Query: 291 REDLYYRLNVFPIEMPALRDRIDDIPLLLQELMTRMEAEGAQPI-CFTPRAINSMMEHDW 349
           R DLYYRLNV  + +P LR+R +DIPLL +  + +  A   +P+    P  +  ++ +DW
Sbjct: 302 RADLYYRLNVATLPLPPLRERREDIPLLFEHFLLQAAARHERPVPAADPARMGPLLAYDW 361

Query: 350 PGNVRELANLVERMVI 365
           PGNVREL N+ +R V+
Sbjct: 362 PGNVRELRNVADRCVL 377