Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  258 bits (658), Expect = 4e-73
 Identities = 146/342 (42%), Positives = 198/342 (57%), Gaps = 21/342 (6%)

Query: 150 LIEQVSTTEANVLILGESGTGKEVVARNIHYHSGRRNGPFVPINCGAIPAELLESELFGH 209
           L  +V+ T+A VL+ GESG GKEVVAR IH HS RR GPFV INC AIP  LLE+ LFG+
Sbjct: 143 LAARVAQTDATVLLTGESGVGKEVVARYIHNHSARRKGPFVAINCAAIPESLLEATLFGY 202

Query: 210 EKGAFTGAITARKGRFELAEGGTLFLDEIGDMPMSMQVKLLRVLQERCFERVGGNSTIKA 269
           EKGAFTGA  A+ G+FE A+ GTL LDE+ +MP+++Q KLLRVLQER  ERVGG   ++ 
Sbjct: 203 EKGAFTGANQAQAGKFEQAQNGTLLLDEVTEMPLALQAKLLRVLQEREVERVGGKQPVRL 262

Query: 270 NVRVIAATHRNLEEMIDGQKFREDLYYRLNVFPIEMPALRDRIDDIPLLLQELMTRMEAE 329
           ++RV+A ++R++ E +    FREDLYYRLNVFP+ +PALR R DD+  L +  +     +
Sbjct: 263 DIRVVATSNRDMAEAVAKGIFREDLYYRLNVFPLLIPALRQRPDDVVPLARHFLADQGGK 322

Query: 330 GAQP-ICFTPRAINSMMEHDWPGNVRELANLVERMVILYPNSLVDVNHLPTKYR----YS 384
             +P +  TP A  ++  H WPGNVREL N+++R +IL P   VD  HL    R     +
Sbjct: 323 SGRPGLLLTPAAEQALRVHSWPGNVRELVNVMQRALILAPGDQVDAAHLHLVARPGAPAA 382

Query: 385 DIPEFQPEPSRFSSVEEQERDVLEGIFAEDFNFEEPQEFVPDIDAPQALPPEGVNLKELL 444
             P + P P     V +      + I  E+                      G    + +
Sbjct: 383 AAPAYVPPPPVMMEVPQLAPQAPQAISVEE----------------DGALQSGGKKADSI 426

Query: 445 ADLEVNLINQALEAQGGVVARAADMLGMRRTTLVEKMRKYNM 486
            D E  LI + L + GG    A + LG+   TL  K+R+Y +
Sbjct: 427 KDWERELILETLASVGGSRKLAVEKLGISERTLRHKLRQYRL 468