Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., transcriptional regulator, NifA subfamily, Fis Family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  249 bits (636), Expect = 2e-70
 Identities = 124/256 (48%), Positives = 173/256 (67%)

Query: 137 LVGQSMGIQEVRHLIEQVSTTEANVLILGESGTGKEVVARNIHYHSGRRNGPFVPINCGA 196
           +VG+S  + +V+  IE+V+ T A VL+LGESG GK ++AR +H  S R   PFV +NC +
Sbjct: 197 IVGRSAAMLDVQRQIERVAPTRATVLLLGESGVGKTLIARLLHNLSDRMVHPFVKVNCAS 256

Query: 197 IPAELLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGDMPMSMQVKLLRVLQER 256
           IP  LLE+ELFGHEKGAFTGA   R GRFE A  GT+FLDEIG++P  +Q KLLRV+Q+R
Sbjct: 257 IPETLLEAELFGHEKGAFTGAAAVRAGRFEEAHRGTIFLDEIGELPPGIQAKLLRVIQDR 316

Query: 257 CFERVGGNSTIKANVRVIAATHRNLEEMIDGQKFREDLYYRLNVFPIEMPALRDRIDDIP 316
            FER+G N T + +VR++AAT+R+L  + +  +FR+DLYYRL VFPI +P+LR+R DD+ 
Sbjct: 317 EFERLGSNQTHRVDVRIVAATNRDLALLSEQGRFRQDLYYRLCVFPIRVPSLRERPDDVE 376

Query: 317 LLLQELMTRMEAEGAQPICFTPRAINSMMEHDWPGNVRELANLVERMVILYPNSLVDVNH 376
            LL   + +   +  + I   P A+  +  H+WPGNVRE+ NL+ER+ IL  +  +D   
Sbjct: 377 RLLNHFLAKAARDYRRVITLAPDALGLLRRHEWPGNVREMENLIERLAILSESGQIDRRF 436

Query: 377 LPTKYRYSDIPEFQPE 392
           L     +S     QP+
Sbjct: 437 LEPLLEHSATENAQPD 452