Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 524 a.a., nif-specific transcriptional activator NifA from Klebsiella michiganensis M5al

 Score =  254 bits (649), Expect = 5e-72
 Identities = 128/238 (53%), Positives = 169/238 (71%)

Query: 136 SLVGQSMGIQEVRHLIEQVSTTEANVLILGESGTGKEVVARNIHYHSGRRNGPFVPINCG 195
           ++VG+S  ++++  +I QVS  +  VL+ GESGTGKE++A  IH++S R    FV  NC 
Sbjct: 211 NMVGKSPAMRQIMDIIRQVSRWDTTVLVRGESGTGKELIANAIHHNSPRAAAAFVKFNCA 270

Query: 196 AIPAELLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGDMPMSMQVKLLRVLQE 255
           A+P  LLESELFGHEKGAFTGA+  RKGRFELA+GGTLFLDEIG+   S Q KLLR+LQE
Sbjct: 271 ALPDNLLESELFGHEKGAFTGAVRQRKGRFELADGGTLFLDEIGESSASFQAKLLRILQE 330

Query: 256 RCFERVGGNSTIKANVRVIAATHRNLEEMIDGQKFREDLYYRLNVFPIEMPALRDRIDDI 315
              ERVGG+ T++ NVR+IAAT+R+LEE +    FREDLYYRLNV PI +P LR+R +DI
Sbjct: 331 GEMERVGGDETLRVNVRIIAATNRHLEEEVRLGHFREDLYYRLNVMPIALPPLRERQEDI 390

Query: 316 PLLLQELMTRMEAEGAQPICFTPRAINSMMEHDWPGNVRELANLVERMVILYPNSLVD 373
             L   L+ ++     + +  +  AI  +ME+ WPGNVREL N +ER  +L  + L+D
Sbjct: 391 AELAHFLVRKIAHSQGRTLRISDGAIRLLMEYSWPGNVRELENCLERSAVLSESGLID 448