Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 690 a.a., Formate hydrogenlyase transcriptional activator from Enterobacter sp. TBS_079

 Score =  244 bits (623), Expect = 7e-69
 Identities = 141/359 (39%), Positives = 213/359 (59%), Gaps = 54/359 (15%)

Query: 134 FRSLVGQSMGIQEVRHLIEQVSTTEANVLILGESGTGKEVVARNIHYHSGRRNGPFVPIN 193
           F  ++ +S  +  V   +E V+ +++ VLILGE+GTGKE++AR IH  S R +   V +N
Sbjct: 378 FGEIISRSDAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSNRNSRRMVKMN 437

Query: 194 CGAIPAELLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGDMPMSMQVKLLRVL 253
           C A+PA LLES+LFGHE+GAFTGA + R GRFELA+  +LFLDE+GDMP+ +Q KLLRVL
Sbjct: 438 CAAMPAGLLESDLFGHERGAFTGASSQRLGRFELADKSSLFLDEVGDMPLELQPKLLRVL 497

Query: 254 QERCFERVGGNSTIKANVRVIAATHRNLEEMIDGQKFREDLYYRLNVFPIEMPALRDRID 313
           QE+ FER+G N  I+ +VR+IAAT+R+L++M+  ++FR DLYYRLNVFPI +P LR+R +
Sbjct: 498 QEQEFERLGSNKLIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPICLPPLRERPE 557

Query: 314 DIPLLLQELMTRMEAEGAQPICFTP-RAINSMMEHDWPGNVRELANLVERMVILYPNSLV 372
           DIPLL++    ++     + I   P   + ++   +WPGNVREL N++ER V+L   +++
Sbjct: 558 DIPLLVKAFTAKIARRMGRNIDSIPAETLRTLSSMEWPGNVRELENVIERAVLLTRGNVL 617

Query: 373 DVNHLPTKYRYSDIPEFQPEPSRFSSVEEQERDVLEGIFAEDFNFEEPQEFVPDIDAPQA 432
            ++                                                +P++  P+ 
Sbjct: 618 QLS------------------------------------------------LPEVSLPET 629

Query: 433 LPPEGVNLKELLADLEVNLINQALEAQGGVVA---RAADMLGMRRTTLVEKMRKYNMQR 488
            P    ++ +   D E  LI + L+   GVVA    AA  LG++RTTL+ +M++  + +
Sbjct: 630 -PVTATDVAQEGED-EYQLIMRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLGIDK 686