Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  276 bits (706), Expect = 1e-78
 Identities = 149/351 (42%), Positives = 222/351 (63%), Gaps = 40/351 (11%)

Query: 137 LVGQSMGIQEVRHLIEQVSTTEANVLILGESGTGKEVVARNIHYHSGRRNGPFVPINCGA 196
           ++G+S  I+EV  ++++ + + + VLI GESGTGKE+VAR IH+ S R +GPFV +NC A
Sbjct: 145 IIGRSKAIREVLDMVDRAAPSRSTVLITGESGTGKELVARAIHFSSPRNSGPFVSVNCMA 204

Query: 197 IPAELLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGDMPMSMQVKLLRVLQER 256
           +   +LESELFGHEKG+FTGA+  R+GRFE A+GGTLFLDEIG++   +QVKLLRVLQER
Sbjct: 205 LNPGVLESELFGHEKGSFTGAMAMRRGRFEQADGGTLFLDEIGELTPELQVKLLRVLQER 264

Query: 257 CFERVGGNSTIKANVRVIAATHRNLEEMIDGQKFREDLYYRLNVFPIEMPALRDRIDDIP 316
            FERVGG   I+ ++RV+AAT+++L++ ++   FREDLYYRLNV  + +P LR+R +DIP
Sbjct: 265 RFERVGGGDEIEVDIRVVAATNKDLQKEVENGTFREDLYYRLNVVHVALPPLRERREDIP 324

Query: 317 LLLQELMTRMEAE-GAQPICFTPRAINSMMEHDWPGNVRELANLVERMVILYPNSLVDVN 375
           LL+   + ++  + G +P  FTP A + +  ++WPGN+R+L N+VER ++L  +  V V+
Sbjct: 325 LLVGHFVEKLARDNGMKPKTFTPEAHDYLTGYEWPGNIRQLQNVVERCLVLVASDTVGVD 384

Query: 376 HLPTKYRYSDIPEFQPEPSRFSSVEEQERDVLEGIFAEDFNFEEPQEFVPDIDAPQALPP 435
            LP        PE + E S+  S  +                               L P
Sbjct: 385 DLP--------PEIRDEESQLKSAVD-------------------------------LLP 405

Query: 436 EGVNLKELLADLEVNLINQALEAQGGVVARAADMLGMRRTTLVEKMRKYNM 486
             ++L + L  +E  LI +AL     V  +AA++LG+ ++ L  K++KY +
Sbjct: 406 VRLDLADTLEKIEAALIRRALVRAEFVQVKAAELLGISKSLLQYKLKKYGI 456