Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., chemotaxis protein CheY from Burkholderia phytofirmans PsJN

 Score =  249 bits (635), Expect = 2e-70
 Identities = 153/382 (40%), Positives = 215/382 (56%), Gaps = 45/382 (11%)

Query: 137 LVGQSMGIQEVRHLIEQVSTTEANVLILGESGTGKEVVARNIHYHSGRRNGPFVPINCGA 196
           ++GQ+  +Q++   I ++S + A VLI GESGTGKE+VAR +H HS R NGPF+ +N  A
Sbjct: 137 MLGQAPAMQDMFRAIGRLSHSAATVLITGESGTGKELVARALHRHSPRANGPFIALNTAA 196

Query: 197 IPAELLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGDMPMSMQVKLLRVLQER 256
           IP +LLESELFGHE+GAFTGA   R+GRFE AE GTLFLDEIGDMP  +Q +LLRVL + 
Sbjct: 197 IPKDLLESELFGHERGAFTGAQAMRQGRFEQAENGTLFLDEIGDMPFDLQTRLLRVLSDG 256

Query: 257 CFERVGGNSTIKANVRVIAATHRNLEEMIDGQKFREDLYYRLNVFPIEMPALRDRIDDIP 316
            F RVGG++ ++ANVRVIAATH+NLE  +    FREDLY+RLNV  + +PALR+R +DIP
Sbjct: 257 QFYRVGGHNPLRANVRVIAATHQNLESRVRQGLFREDLYHRLNVIRLRLPALRERSEDIP 316

Query: 317 LLLQELMTRMEAE-GAQPICFTPRAINSMMEHDWPGNVRELANLVERMVILYPNSLVDVN 375
           LL +  + +   + G +P   +  A+  +    +PGNVR+L NL   + ++ P   +++ 
Sbjct: 317 LLTRHFLQKSARDLGVEPKRVSEEALAHLASLPFPGNVRQLENLANWLTVMAPAQTIEIK 376

Query: 376 HLPTKYRYSDIPEFQPEPSRFSSVEEQERDVLEGIFAEDFNFEEPQEFVPDIDAPQALPP 435
            LP        P+  P  +  S +      V   I A D         VP      A  P
Sbjct: 377 DLP--------PDLGPAQAGVSDLTGGGGGV---IGAGDATLAGG---VPVNGTSAATHP 422

Query: 436 EGVN----------------------LKELLADL--------EVNLINQALEAQGGVVAR 465
                                     L+E  AD+        E  +I +AL+   G    
Sbjct: 423 AAAGGMPAATTVSAWEGGLRTEVARMLRENAADVMDELARRFEAAVIREALDFTRGRKVE 482

Query: 466 AADMLGMRRTTLVEKMRKYNMQ 487
           AA+ LG+ R T+  K+++ N++
Sbjct: 483 AAERLGIGRNTITRKIQELNLE 504