Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., Fis family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  243 bits (621), Expect = 8e-69
 Identities = 118/239 (49%), Positives = 172/239 (71%), Gaps = 4/239 (1%)

Query: 147 VRHLIEQ---VSTTEANVLILGESGTGKEVVARNIHYHSGRRNGPFVPINCGAIPAELLE 203
           +RH+I+Q   V+ T++ VLI GE+GTGKE+VARN+H  S R++ P + +NC A  A LLE
Sbjct: 184 IRHMIQQLHMVANTDSTVLICGENGTGKELVARNLHQLSRRKDKPMISVNCAAFSASLLE 243

Query: 204 SELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGDMPMSMQVKLLRVLQERCFERVGG 263
           SELFGHEKGAFTGA   RKGRFELA  GTLFLDE+ ++ +  Q KLLRV+QE+ FER+GG
Sbjct: 244 SELFGHEKGAFTGATQQRKGRFELAHQGTLFLDEVAELSLEAQSKLLRVIQEQSFERLGG 303

Query: 264 NSTIKANVRVIAATHRNLEEMIDGQKFREDLYYRLNVFPIEMPALRDRIDDIPLLLQELM 323
           + TIK ++R++AA+H +L + ++   FR DLYYRLNVFPI++P LR R++D+P L+  ++
Sbjct: 304 SETIKVDIRLVAASHHDLLKRVEQGLFRMDLYYRLNVFPIQVPPLRARLEDMPELVSHIL 363

Query: 324 TRMEAE-GAQPICFTPRAINSMMEHDWPGNVRELANLVERMVILYPNSLVDVNHLPTKY 381
             +  + G +    + + +  +M + WPGNVREL N++ER  IL    ++ ++ +PT +
Sbjct: 364 HSLNRKLGKKLRGVSQKGLQKLMAYSWPGNVRELQNILEREAILSQTDILQIHAMPTHH 422