Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., Sensor histidine kinase from Pseudomonas fluorescens FW300-N2E2

 Score = 82.0 bits (201), Expect = 3e-20
 Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 31/239 (12%)

Query: 120 LQRLSSLGR-MVASLAHQVRTPLSSAMLYAANLAAPNLPPATRERFQSKLVDRLHDLEKQ 178
           LQ+L ++ R +V +++H++RTP++        L +   P A R+++ + +   + DL++ 
Sbjct: 302 LQQLLAIQRELVRAVSHELRTPVARLRFGLEMLGSATTPQA-RDKYLAGMDHDIEDLDRL 360

Query: 179 VNDMLLFAKGGDNKVVMPFSIGDLAA-------EFMPM-----VETALKNNQIDY-GQEV 225
           V++ML +A+       + F   DL A       E  P+     VE  L  + +D  G  V
Sbjct: 361 VDEMLTYARLEQGSPALNFQRVDLDALVNQVIDELGPLRAGITVERGLCLSAVDCDGAWV 420

Query: 226 ESEETMLLGNANALASALSNLVMNALQIAGKGSQIDVFFRPVNGELKISVQDNGPGVPES 285
           E+E   L         AL NLV NA++ A   S++ V ++      ++ V+D+GPGVPE+
Sbjct: 421 EAEPRFL-------HRALQNLVGNAMRHAS--SRVTVSYQVGQLRCRVDVEDDGPGVPEA 471

Query: 286 LQHKIMEPFF------TTRSQGTGLGLAVVQMVCRAHGGRLEL-ISKEGEGACFTMCIP 337
              +I +PF          S G GLGL++V+ +   H GR  +  SK   GACF++  P
Sbjct: 472 AWERIFKPFLRLDDSRARASGGHGLGLSIVRRIIHWHDGRALIGKSKSLGGACFSLSWP 530