Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., Sensory box histidine kinase from Pseudomonas fluorescens FW300-N2E2

 Score = 94.4 bits (233), Expect = 7e-24
 Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 41/367 (11%)

Query: 1   MMSSAVQE-QHSHLDSLEDQVERYKQVLDVMPAGVILLDTQGIVREANPEAQRLL--DVP 57
           +M+ A++E Q +++D L    +R + VLD +  G++++D +G +   NP AQR L  D  
Sbjct: 238 VMAEALREHQATNVDELLAGQQRLQAVLDSIDDGLLMIDRKGQLEHLNPVAQRQLGWDEE 297

Query: 58  LVG-------------EKWYSVIQ---IAFAPRD----DDGHEISLRNGRKVRLAISAST 97
            +G             E+ + V++   +  AP D     DG    L              
Sbjct: 298 RLGQGLGEALGRLELDEELHLVLRGGSLERAPEDLSVEVDGESRVLTYSLTPVSHTQGHI 357

Query: 98  TGQLILITDLTETRLLQSRISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLP 157
            G ++++ D+TE R  +   S+          V   +H++RTP+ + M  A  L    L 
Sbjct: 358 LGAVMVLHDVTEQRAFERVRSE---------FVLRASHELRTPV-TGMHMAFGLLQERLH 407

Query: 158 PATRER---FQSKLVDRLHDLEKQVNDMLLFAK---GGDNKVVMPFSIGDLAAEFMPMVE 211
            +   R     + + + +  L + +ND+L F++   G     + P SI DL         
Sbjct: 408 FSEESREADLLNTVTEEMQRLMQLINDLLNFSRYQNGLQKLTLAPCSIDDLLEAARLRFA 467

Query: 212 TALKNNQIDYGQEVESEETMLLGNANALASALSNLVMNALQIAGKGSQIDVFFRPVNGEL 271
              +   I+    ++     L  +A  L   L NL+ NA++   +  QI +  R     +
Sbjct: 468 EQAQTKGIELLVAIQGPLPRLHADAAQLDRVLDNLIDNAMRHTAENGQIRLQARRHGERV 527

Query: 272 KISVQDNGPGVPESLQHKIMEPFFTT--RSQGTGLGLAVVQMVCRAHGGRLELISKEGEG 329
            ISV+DNG G+    Q +I EPF     +  G GLGLA+ + + + HGGR+ + S+ G+G
Sbjct: 528 IISVEDNGEGIAYGQQGRIFEPFVQVGRKKGGAGLGLALCKEIVQLHGGRMGVYSRPGQG 587

Query: 330 ACFTMCI 336
             F M +
Sbjct: 588 TQFYMAL 594