Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  266 bits (681), Expect = 5e-76
 Identities = 152/332 (45%), Positives = 206/332 (62%), Gaps = 5/332 (1%)

Query: 9   QHSHLDSLEDQVERYKQVLDVMPAGVILLDTQGIVREANPEAQRLLDVPLVGEKWYSVIQ 68
           +   L+  E    R + VLD++P GVI++D  G+VR+ANP    LL  PLVG  W  VI 
Sbjct: 59  RRQELEEKERLAHRLQNVLDLLPGGVIVIDGHGVVRDANPVGLELLGEPLVGAPWRDVIG 118

Query: 69  IAFAPRDDDGHEISLRNGRKVRLAISAST--TGQLILITDLTETRLLQSRISDLQRLSSL 126
             FAPR DDGHE+SLRNGR++ +A  + +   GQL+L+TDLTETR LQ +++  +RLSSL
Sbjct: 119 RCFAPRKDDGHEVSLRNGRRLSIATRSLSGEPGQLVLLTDLTETRRLQDQLARHERLSSL 178

Query: 127 GRMVASLAHQVRTPLSSAMLYAANLAAPNLPPATRERFQSKLVDRLHDLEKQVNDMLLFA 186
           GRMVASLAHQ+RTPLS+A+LYA++L    L    + RF   L  RLH+LE QV DML+FA
Sbjct: 179 GRMVASLAHQIRTPLSTALLYASHLEQGGLSEEQQRRFAGNLKARLHELEHQVRDMLVFA 238

Query: 187 KGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYGQEVESEETMLLGNANALASALSNL 246
           + GD  +    S G+L        E+ L+   + +  +V   E  +L N + L  AL NL
Sbjct: 239 R-GDLPLNDRLSPGELLCSLRSAAESQLQGVAVRWQCDVRGGE--ILCNRDTLIGALLNL 295

Query: 247 VMNALQIAGKGSQIDVFFRPVNGELKISVQDNGPGVPESLQHKIMEPFFTTRSQGTGLGL 306
           V NALQ      ++ +        L+I + DNG GV   +  ++ EPFFTTR+ GTGLGL
Sbjct: 296 VENALQACEGERRLKIHLYRREETLRICISDNGKGVDADILARLGEPFFTTRAAGTGLGL 355

Query: 307 AVVQMVCRAHGGRLELISKEGEGACFTMCIPL 338
           AV + V RAH G L+L S+ G G C ++ +PL
Sbjct: 356 AVAKAVARAHHGELQLRSRCGRGTCASVALPL 387