Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 678 a.a., PAS from Pseudomonas syringae pv. syringae B728a

 Score = 93.2 bits (230), Expect = 2e-23
 Identities = 99/381 (25%), Positives = 168/381 (44%), Gaps = 77/381 (20%)

Query: 26  VLDVMPAGVILLDTQGIVREANPEAQRLLDVPLVGEKWYSVIQIAFAPRDD--------- 76
           ++D MP+ +I LD Q  V + N EA  L    L  E     I +AF P            
Sbjct: 292 IIDSMPSAMIALDEQLYVTQWNQEATALSGTTL-DEALNQPIFLAFEPMRSFLPQIKHTV 350

Query: 77  DGHEIS-------LRNGRKVRLAIS------ASTTGQLILITDLTETRLLQSRISDLQRL 123
           + H ++       ++N      A++       +  G +I I D+T+   L+  +   +++
Sbjct: 351 ERHSVTKIERVTWIKNDEPRHYALTFYPLTGDAGRGVVIRIDDITQRISLEEMMVQSEKM 410

Query: 124 SSLGRMVASLAHQVRTPLSSAMLYAANL---AAPNLPPATRER-------------FQSK 167
            S+G + A +AH++  PL + +    N+    +P LP    +               +S+
Sbjct: 411 LSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPELPKNIEQAEADGIDLAQVNHYLESR 470

Query: 168 LVDRLHD--------LEKQVNDMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQI 219
            V +L D          K V+ ML F++    ++    S  DL A     VE A  +  +
Sbjct: 471 EVPKLLDGIQQAGARAAKIVSHMLNFSRLSSRQL----SPCDLPALIDQAVEIASNDFDL 526

Query: 220 DYGQEVESEETML-----LGNANALASALSNLVMNALQIAGKGSQIDVFFRPVNGE---- 270
             G + + +  +      LG    +A+ L  +++N L+ A +     +  RP + E    
Sbjct: 527 TIGFDFKGQHIIRQFDPELGPVPCIANELEQVLLNLLKNAAQA----IHQRPESEEPGRI 582

Query: 271 ----------LKISVQDNGPGVPESLQHKIMEPFFTTR--SQGTGLGLAVVQ-MVCRAHG 317
                      +I V+DNG G+ ES++ +  EPFFTT+   QGTGLGL+V   +V   H 
Sbjct: 583 TLRTRLNPPWAEIQVEDNGIGMSESIRKRTFEPFFTTKEIGQGTGLGLSVSYFIVTNNHK 642

Query: 318 GRLELISKEGEGACFTMCIPL 338
           G++E+ S  G G CFT+ +PL
Sbjct: 643 GQMEVHSSLGTGTCFTLRLPL 663