Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 984 a.a., Two-component sensor kinase CbrA from Pseudomonas syringae pv. syringae B728a

 Score =  111 bits (277), Expect = 9e-29
 Identities = 85/350 (24%), Positives = 170/350 (48%), Gaps = 28/350 (8%)

Query: 2   MSSAVQEQHSHLDSLE---DQVERY-KQVLDVMPAGV--------ILLDTQGIVREANPE 49
           + S +++ HS L  L    D + RY +Q L  +P GV        IL+  + +       
Sbjct: 609 IESRLEDYHSRLTGLAAELDALRRYHRQTLQELPMGVCSLAEDQEILMWNRAMEELTGIV 668

Query: 50  AQRLLDVPL--VGEKWYSVIQIAFAPRDDDGHEISLRNGRKVRLA----------ISAST 97
           AQR++   L  + E W S++    +  D+  H+  L    + R            ++   
Sbjct: 669 AQRVVGSRLETIAEPWKSLLTGFTSLPDEHLHKQKLGLDGQTRWLNLHKAAINEPLAPGN 728

Query: 98  TGQLILITDLTETRLLQSRISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLP 157
           +G ++L+ DLT+T++L+ ++   +RL+S+GR+ A +AH++  P++     A NL      
Sbjct: 729 SGLVVLVEDLTDTQMLEDKLVHSERLASIGRLAAGVAHEIGNPITGIACLAQNLREEREE 788

Query: 158 PATRERFQSKLVDRLHDLEKQVNDMLLFAKGGDNK-VVMPFSIGDLAAEFMPMVETALKN 216
               +   S+++++   + + V  ++ FA  G ++       +  +A + + ++    +N
Sbjct: 789 DGELKEISSQILEQTKRVSRIVQSLMSFAHAGAHQHSDEAVCLAVVAQDAIGLLALNRRN 848

Query: 217 NQIDYGQEVESEETMLLGNANALASALSNLVMNALQIAGKGSQIDVFFRPVNGELKISVQ 276
            ++ +   + + E   +G+   LA  L NL+ NA   +  GS + V        + + V+
Sbjct: 849 FEVHF-YNLCNPEHWAVGDPQRLAQVLINLLSNARDASPAGSAVRVRSEVSEHTVDLIVE 907

Query: 277 DNGPGVPESLQHKIMEPFFTTR--SQGTGLGLAVVQMVCRAHGGRLELIS 324
           D G G+ +++  ++ EPFFTT+   +GTGLGLA+V  +   H G++ + S
Sbjct: 908 DEGSGISKAIMDRLFEPFFTTKDPGEGTGLGLALVYSIVEEHYGQITIDS 957