Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 760 a.a., Multi-sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  110 bits (275), Expect = 1e-28
 Identities = 97/361 (26%), Positives = 166/361 (45%), Gaps = 53/361 (14%)

Query: 18  DQVERYKQ-VLDVMPAGVILLDTQGIVREANPEAQRLLDVPLV--------------GEK 62
           D+  R+ + VL  + AGVI +D +G +   NP A  L D  L               GE 
Sbjct: 388 DERRRFTETVLAGVSAGVIGVDAEGKINLPNPSACALFDRDLTLWQGQPIGALLAEFGEV 447

Query: 63  WYSVIQIAFAPRDDDGHEISLRNGRK-----VRLAISAST---TGQLILITDLTETRLLQ 114
             +V Q    P +    E+ +R  R+     VR+A   S    TG +    D+TE     
Sbjct: 448 LTAVRQRPDRPVE---REMEIRIDRRPVTLLVRVAAECSAQGITGFVFTFDDITE----- 499

Query: 115 SRISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLP-----PATRERFQSKLV 169
             +   QR ++   +   +AH+++ PL+   L A  L    L      P T  R    ++
Sbjct: 500 --LQSAQRKAAWADVARRIAHEIKNPLTPIQLSAERLKRKYLKQITDDPETFARCTETII 557

Query: 170 DRLHDLEKQVNDMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYGQEVESEE 229
             + D+ + V++   FA+    ++  P  +G+L  + + +  TA    QI +  E+   +
Sbjct: 558 RHVGDIGQMVDEFSAFARMPAPEI-RPCDLGELVLQSVVLQRTAY--GQIGFSTELPEGK 614

Query: 230 TMLLGNANALASALSNLVMNALQ-IAGK-----------GSQIDVFFRPVNGELKISVQD 277
            ++  +   +  AL+NL+ NA++ I G+             +I V     N +  + + D
Sbjct: 615 VIVAADGRQITQALTNLLKNAVEAIQGRDRPAEGAPPLPAGRIAVSLTLTNDQAVVRIVD 674

Query: 278 NGPGVPESLQHKIMEPFFTTRSQGTGLGLAVVQMVCRAHGGRLELISKEGEGACFTMCIP 337
           NG G+P+    ++ EP+ TTR++GTGLGLA+V+ +   HGG L L +  G GA  ++ +P
Sbjct: 675 NGRGLPDMETKRLTEPYVTTRAKGTGLGLAIVKKILEDHGGDLVLENASGGGAAISLTLP 734

Query: 338 L 338
           L
Sbjct: 735 L 735