Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., Multi-sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  106 bits (264), Expect = 2e-27
 Identities = 81/346 (23%), Positives = 163/346 (47%), Gaps = 29/346 (8%)

Query: 24  KQVLDVMPAGVILLDTQGIVREANPEAQRLLDVP---LVGEKWYSV-------IQIAFAP 73
           + +L  +  G++ +D +G +   NP A+++  +    ++G+ ++++       + +    
Sbjct: 274 ENILASVADGIVAVDLKGTITAFNPAAEQMYSMSADAVIGKPYHALFISGTDMVSVLLDT 333

Query: 74  RDDDGHEISLRN---GRKVRLAISASTT----------GQLILITDLTETRLLQSRISDL 120
            +     I +          L ISAS++          G ++++ D++E   L  ++   
Sbjct: 334 LETGCTHIGVTPDLPNLDGTLKISASSSVLRDGEGQPIGAVVVLKDVSERDRLMVQVMRA 393

Query: 121 QRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLPPATRERFQSKLVDRLHDLEKQVN 180
            RL++LG + A +AH++R PL+S   +   L      P   + +   ++ ++  L   + 
Sbjct: 394 DRLAALGELTAGIAHEIRNPLTSIRGFVQYLMEC-ASPKEWQHYGPLIIRQVDSLNHIIT 452

Query: 181 DMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYGQEVESEETMLLGNANALA 240
           ++L F +    ++       D  A+ M  +       +I+   ++E E   +  +  +L 
Sbjct: 453 ELLAFGRPRAPRIDKVHL--DQIAQEMAFLARGKSEARIE--MDLEGEVPAIEADGESLK 508

Query: 241 SALSNLVMNALQIAGKGSQIDVFFRPVNGE-LKISVQDNGPGVPESLQHKIMEPFFTTRS 299
            AL NL++NA+Q   K   + V  R +  + + + V D+G G+      K+ +PFF+T+ 
Sbjct: 509 QALLNLIINAMQAISKDGSVTVAVRRLGDDHVMVKVSDDGIGLAPDYLDKVFDPFFSTKP 568

Query: 300 QGTGLGLAVVQMVCRAHGGRLELISKEGEGACFTMCIPLERQADSS 345
            GTGLGLAVV  +  AH G + L S+ GEG   T+ +P+ R    S
Sbjct: 569 AGTGLGLAVVHRIVDAHQGVITLDSRLGEGTVVTIRLPVVRSKQES 614