Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score = 94.0 bits (232), Expect = 7e-24
 Identities = 64/256 (25%), Positives = 127/256 (49%), Gaps = 17/256 (6%)

Query: 90  RLAISASTTGQLILITDLTETRLLQSRISDLQRLSSLGRMVASLAHQVRTPLSS---AML 146
           ++ +S+ +  Q +  T     R + + I + + LS+      +++H++RTPL+    A+ 
Sbjct: 172 QIQLSSRSQVQPLASTFNEMARHISALIENQKHLSN------AVSHEIRTPLARLKFALA 225

Query: 147 YAANLAAPNLPPATRERFQSKLVDRLHDLEKQVNDMLLFAKGGDNKVVMPFSIGDLAAEF 206
                 AP+  PA R+ F  ++   + ++E  + ++L +A     +  + F   +L    
Sbjct: 226 LVPQYCAPDSDPAQRQAFLDEMQQDVKEMETLLQELLTYASLESQQQDLEFECCELTRLT 285

Query: 207 MPMVETALKNNQIDYGQEVESEETMLLGNANALASALSNLVMNALQIAGKGSQIDVFFRP 266
              +      + I    + ++ E  ++G+ + +  AL NL++NA + A   S I +  R 
Sbjct: 286 QQTISRLQNRHSIPIYFDEQTPELKVMGDPSLIERALQNLIINAQRFAQ--SHITIAIRQ 343

Query: 267 VNGELKISVQDNGPGVPESLQHKIMEPFFTTR-----SQGTGLGLAVVQMVCRAHGGRLE 321
            N  +++ V D+GPG+    Q KI EPF+ ++     ++G GLGLA+++ +   H GR+ 
Sbjct: 344 DNKSVQLEVMDDGPGIAAVDQEKIFEPFYRSKVVQNGNKGHGLGLAIIKRIMHKHNGRVS 403

Query: 322 LISKEGEGACFTMCIP 337
           L S+ G    FT+  P
Sbjct: 404 LASEPG-NTVFTLSWP 418