Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 729 a.a., multi-sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  116 bits (290), Expect = 2e-30
 Identities = 95/356 (26%), Positives = 164/356 (46%), Gaps = 43/356 (12%)

Query: 26  VLDVMPAGVILLDTQGIVREANPEAQRLL---DVPLVGEKWYSVIQIAFA---------- 72
           V+  +P G+++LD  G V   N  A+ LL   D    G    +V+    A          
Sbjct: 318 VVTSLPDGLVVLDGAGRVATCNAAARDLLRLGDAVPAGAAPEAVLPAPLAELAGRLTGGA 377

Query: 73  PRDDD-------GHEISL-----------RNGRKVRLAIS-ASTTGQLILITDLTETRLL 113
           P   D       G E++L            + R VR+A   A+  G ++++ DL E R L
Sbjct: 378 PDGGDADAAPSLGAEVTLDCPVAGGPPVPMSVRGVRIAAGDAADAGAILILRDLREVRRL 437

Query: 114 QSRISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLPPATRERFQSK-LVDRL 172
           Q  +   ++L+++G + A +AH++R PLSS   YA    +      + +R  ++ +V  +
Sbjct: 438 QDEVRRREKLAAIGSLAAGVAHELRNPLSSIKGYATYFGS-RFDEGSEDREAARVMVQEV 496

Query: 173 HDLEKQVNDMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYGQEVESEETML 232
             L + ++D++  A+  D     P   G L    + +V     +  +    E +  +   
Sbjct: 497 ERLNRVISDLIGLARPSDI-APRPVDAGFLVHHVLRLVRQDAAHRGVTVRVEPDGAQDGA 555

Query: 233 LGNA-------NALASALSNLVMNALQIAGKGSQIDVFFRPVNGE-LKISVQDNGPGVPE 284
           +G+        +  + AL N+ +NAL+    G ++ V      G  + ++V+D G G+  
Sbjct: 556 VGSLPRALLDPDRFSQALLNVFLNALEAMPSGGELSVRLAAAPGNRIAVAVRDTGTGIAP 615

Query: 285 SLQHKIMEPFFTTRSQGTGLGLAVVQMVCRAHGGRLELISKEGEGACFTMCIPLER 340
                I +P+FTT+SQGTGLGLA+V  +  AHGG + L S  G+G   T  +P E+
Sbjct: 616 EHLATIFDPYFTTKSQGTGLGLAIVHKIVEAHGGEVSLRSALGQGTEITFLLPAEQ 671