Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 678 a.a., multi-sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 95.5 bits (236), Expect = 4e-24
 Identities = 92/382 (24%), Positives = 161/382 (42%), Gaps = 63/382 (16%)

Query: 12  HLDSLEDQVERYKQVLDVMPAGVILLDTQGIVREAN------------------------ 47
           HL  L +Q  R + V + M  GV++LD  G +   N                        
Sbjct: 245 HLHQLNEQKGRLEAVFNGMHEGVMVLDATGRIESMNRALTAMFAGIGNKLGATPLEATMK 304

Query: 48  PEAQRLLDVPLVGEKWYSVIQIAFAPRDDDGH--EISLRNGRKVRLAISASTTGQLILIT 105
           PE QR++D  LV          +      +GH  EISL   R       AS    +++  
Sbjct: 305 PELQRMVDEMLVSPNARGT---SMQTDLGEGHAFEISLVPFR------DASGQRMVLVFH 355

Query: 106 DLTETRLLQSRISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLPPATRER-- 163
           D++E   L+    D          VA+++H+++TPL+S   YA  L     PP++R++  
Sbjct: 356 DISEREKLERIRRDF---------VANVSHELKTPLTSIKGYAETLL--EAPPSSRDQMA 404

Query: 164 -FQSKLVDRLHDLEKQVNDMLLFAKG---GDNKVVMPFSIGDLAAEFMPMVETALKNNQI 219
            F   ++   + + K VN +L+ A+    GD   +      ++  + +  +E       I
Sbjct: 405 AFLRTILKNANHMTKMVNSLLVLARSEHKGDKVALTGVDAAEVLRQTVRELEPVATRKDI 464

Query: 220 DYGQEVESEETMLLGNANALASALSNLVMNALQIAGKGSQIDVFFRPVNGELKISVQDNG 279
                V +   ++L + + L     NL+ NA++ +   +++ V     +G + + V D G
Sbjct: 465 VLENGVGAGPLVVLADRDGLVEVFRNLLDNAIKYSPPQTRVAVSATAADGRVTLCVSDQG 524

Query: 280 PGVPESLQHKIMEPFFT-------TRSQGTGLGLAVVQMVCRAHGGRL----ELISKEGE 328
           PG+PE  + +I E F+        T++   GLGLA+ + +  +HGG +     L +    
Sbjct: 525 PGIPEKSRERIFERFYRLDRDGDGTKNGSAGLGLAICRRIVMSHGGDIWVESPLDAATRT 584

Query: 329 GACFTMCIPLERQADSSNSETG 350
           GA F + +   R  D    E G
Sbjct: 585 GAAFFVMLFSPRPEDEGPDENG 606