Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  104 bits (260), Expect = 3e-27
 Identities = 65/243 (26%), Positives = 125/243 (51%), Gaps = 11/243 (4%)

Query: 108 TETRLLQSR--ISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAP-NLPPATRERF 164
           T+ +L +S   +   ++L+ +G++ A +AH +R PL+S  L    L     L P  +E+ 
Sbjct: 124 TQVQLEESHETLRQTEKLALVGKLAAGVAHSIRNPLTSVKLRLFALERSLKLGPDQKEQQ 183

Query: 165 QS--KLVDRLHDLEKQVNDMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYG 222
           +    +   +  L+  V + L F++    ++  P S  D+    + +++  L++  +   
Sbjct: 184 EDFEVIAAEIRHLDAIVTNFLEFSRRPRLRM-QPVSPSDVVDMTLQLLKHRLESFNVAVA 242

Query: 223 QEVESEETMLLGNANALASALSNLVMNALQIAGKGSQIDV-----FFRPVNGELKISVQD 277
                   ++ G+A  L  AL NL++NA +  G    +D+        P+   + I + D
Sbjct: 243 VHRAERLPVVDGDAEQLKEALVNLILNACEAMGYDGTLDITEEKGIINPLGRAVVIRIAD 302

Query: 278 NGPGVPESLQHKIMEPFFTTRSQGTGLGLAVVQMVCRAHGGRLELISKEGEGACFTMCIP 337
           +GPGVP+ ++ ++ +PFF+T+ +GTGLGL + + +   HGG L L S  G+GA F + +P
Sbjct: 303 SGPGVPQHIREEVFQPFFSTKEEGTGLGLPIARRIFEEHGGWLHLHSAHGKGATFVIVLP 362

Query: 338 LER 340
             +
Sbjct: 363 ARK 365