Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 722 a.a., multi-sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  125 bits (314), Expect = 3e-33
 Identities = 93/348 (26%), Positives = 167/348 (47%), Gaps = 40/348 (11%)

Query: 20  VERYK-QVLDVMPAGVILLDTQGIVREANPEAQRLL-------------DVP------LV 59
           +ER++ +++D +P G++ +    +VR ANP A  ++             D+P      + 
Sbjct: 277 LERFQARLVDNLPDGLLTITQDNVVRAANPAAHDIMKARDGSLAGMDVADLPPEVAGCIA 336

Query: 60  GEKWYSVIQIAFAPRDDDGHEISLRNGRKVRLAISASTTGQLILITDLTETRLLQSRISD 119
           G    S     +A R  DG  + +     + +  S     +L++I D T+ R L+  +S+
Sbjct: 337 GPD--SGATPGWANRTVDGAHLEILT---LPIRESDEEHDRLVIIRDRTQIRELEKSLSE 391

Query: 120 LQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLPPATRERFQSKLVDRLHDLEKQV 179
            ++L+++G + A +AH++R PLS+   +A   A         E +   +V     L + +
Sbjct: 392 AEKLAAVGTLAAGVAHEIRNPLSALRGFAQYFAKKLAGKQPDENYAQTMVREADRLNRVI 451

Query: 180 NDMLLFAKGGDNKVVMP--FSIGDLAAEFMPMVETALKNNQIDYGQEVESEETMLLGNAN 237
            D+L  A+    + + P   S+G LAAE   +V       ++           +++ + +
Sbjct: 452 TDLLYLARP---RAIEPREVSLGQLAAELESLVR--FDAGKLGVHMRTSLGPDLVMADED 506

Query: 238 ALASALSNLVMNALQI--------AGKGSQIDVFFRPVNGELKISVQDNGPGVPESLQHK 289
           AL  AL NLV+N+L          AG G +I +     +G + + V+D GPG+    + +
Sbjct: 507 ALKQALLNLVLNSLDALAQCPQPAAGVGREIHISSMASDGGVWVFVRDTGPGMSREQREQ 566

Query: 290 IMEPFFTTRSQGTGLGLAVVQMVCRAHGGRLELISKEGEGACFTMCIP 337
             EPF+TT+ +GTGLGLA+V    R HGGR ++ S+ G G    +  P
Sbjct: 567 AFEPFYTTKKKGTGLGLALVHKTMRDHGGRAQIDSEVGRGTTVALFFP 614